RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PCDHB6Q9Y5E3 794 aa22.54■■□□□ 1.2
TRIM47-207ENST00000593089 VWA8A3KMH1 1905 aa22.53■■□□□ 1.2
TRIM47-207ENST00000593089 TRIP11Q15643 1979 aa22.53■■□□□ 1.2
TRIM47-207ENST00000593089 PAPLNO95428 1278 aa22.53■■□□□ 1.2
TRIM47-207ENST00000593089 U2AF2P26368 475 aaKnown RBP eCLIP22.53■■□□□ 1.2
TRIM47-207ENST00000593089 TOB1P50616 345 aaPredicted RBP22.53■■□□□ 1.2
TRIM47-207ENST00000593089 PDIA5Q14554 519 aa22.53■■□□□ 1.2
TRIM47-207ENST00000593089 RAB34Q9BZG1 259 aa22.53■■□□□ 1.2
TRIM47-207ENST00000593089 FBXW11Q9UKB1 542 aa22.53■■□□□ 1.2
TRIM47-207ENST00000593089 CACNA1HO95180 2353 aa22.53■■□□□ 1.2
TRIM47-207ENST00000593089 CCDC169A6NNP5 214 aa22.52■■□□□ 1.2
TRIM47-207ENST00000593089 E9PMD0 336 aa22.52■■□□□ 1.2
TRIM47-207ENST00000593089 K7ERI5 159 aa22.52■■□□□ 1.2
TRIM47-207ENST00000593089 PI15O43692 258 aa22.52■■□□□ 1.2
TRIM47-207ENST00000593089 AOC1P19801 751 aa22.52■■□□□ 1.2
TRIM47-207ENST00000593089 ELAVL2Q12926 359 aaKnown RBP22.52■■□□□ 1.2
TRIM47-207ENST00000593089 SLC44A3Q8N4M1 653 aa22.52■■□□□ 1.2
TRIM47-207ENST00000593089 IGSF22Q8N9C0 903 aa22.52■■□□□ 1.2
TRIM47-207ENST00000593089 STK24Q9Y6E0 443 aa22.52■■□□□ 1.2
TRIM47-207ENST00000593089 PP2D1A8MPX8 630 aa22.51■■□□□ 1.19
TRIM47-207ENST00000593089 IGFBP6P24592 240 aaPredicted RBP22.51■■□□□ 1.19
TRIM47-207ENST00000593089 PEX3P56589 373 aa22.51■■□□□ 1.19
TRIM47-207ENST00000593089 LIN9Q5TKA1 542 aa22.51■■□□□ 1.19
TRIM47-207ENST00000593089 ST13P5Q8NFI4 369 aaPredicted RBP22.51■■□□□ 1.19
TRIM47-207ENST00000593089 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.51■■□□□ 1.19
TRIM47-207ENST00000593089 DNM3Q9UQ16 869 aa22.51■■□□□ 1.19
TRIM47-207ENST00000593089 DOCK6Q96HP0 2047 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 STK25O00506 426 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 ADAM12O43184 909 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 ST18O60284 1047 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 LAMP2P13473 410 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 CDC25AP30304 524 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 CLCNKBP51801 687 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 PPM1LQ5SGD2 360 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 KRT79Q5XKE5 535 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 PDXDC1Q6P996 788 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.5■■□□□ 1.19
TRIM47-207ENST00000593089 APBB1IPQ7Z5R6 666 aaPredicted RBP22.5■■□□□ 1.19
TRIM47-207ENST00000593089 GRASPQ7Z6J2 395 aaPredicted RBP22.5■■□□□ 1.19
TRIM47-207ENST00000593089 CEP120Q8N960 986 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 PPP1R10Q96QC0 940 aaKnown RBP22.5■■□□□ 1.19
TRIM47-207ENST00000593089 GOLGA2P5Q9HBQ8 144 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 WNT16Q9UBV4 365 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 CA14Q9ULX7 337 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 TNFSF13BQ9Y275 285 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 USP34Q70CQ2 3546 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 PHLPP2Q6ZVD8 1323 aa22.5■■□□□ 1.19
TRIM47-207ENST00000593089 HIP1RO75146 1068 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 B3GAT3O94766 335 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 C8AP07357 584 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 FSHRP23945 695 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 NPTX2P47972 431 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 OSTNP61366 133 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 NTHL1P78549 312 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 IL17AQ16552 155 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 DAW1Q8N136 415 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 NXPE3Q969Y0 559 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 RTP3Q9BQQ7 232 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 CDT1Q9H211 546 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 POLIQ9UNA4 740 aa22.49■■□□□ 1.19
TRIM47-207ENST00000593089 KRBA1A5PL33 1030 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 CCL16O15467 120 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 HNRNPA1P09651 372 aaKnown RBP eCLIP22.48■■□□□ 1.19
TRIM47-207ENST00000593089 SRFP11831 508 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 FGFR3P22607 806 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 RFX1P22670 979 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 OR1D2P34982 312 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 YARSP54577 528 aaKnown RBP22.48■■□□□ 1.19
TRIM47-207ENST00000593089 DMP1Q13316 513 aaPredicted RBP22.48■■□□□ 1.19
TRIM47-207ENST00000593089 ZNF568Q3ZCX4 644 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 C8orf34Q49A92 452 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 DCLRE1AQ6PJP8 1040 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 DTHD1Q6ZMT9 781 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 ACO2Q99798 780 aaKnown RBP22.48■■□□□ 1.19
TRIM47-207ENST00000593089 RUSC1Q9BVN2 902 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 CCDC94Q9BW85 323 aaPredicted RBP22.48■■□□□ 1.19
TRIM47-207ENST00000593089 KMT5AQ9NQR1 393 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 NUMBLQ9Y6R0 609 aa22.48■■□□□ 1.19
TRIM47-207ENST00000593089 SMIM28A0A1B0GU29 152 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 PROB1E7EW31 1015 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 TMEM189-UBE2V1I3L0A0 370 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 I3L4J1 428 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 LAD1O00515 517 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 GRM5P41594 1212 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 HTR4Q13639 388 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 ZRSR1Q15695 479 aaKnown RBP22.47■■□□□ 1.19
TRIM47-207ENST00000593089 UPP1Q16831 310 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 MCTP1Q6DN14 999 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 KCNK18Q7Z418 384 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 CCDC105Q8IYK2 499 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 SLC7A14Q8TBB6 771 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 GPR152Q8TDT2 470 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 UROC1Q96N76 676 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 MRPL4Q9BYD3 311 aaKnown RBP22.47■■□□□ 1.19
TRIM47-207ENST00000593089 TMEM134Q9H6X4 195 aa22.47■■□□□ 1.19
TRIM47-207ENST00000593089 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.47■■□□□ 1.19
TRIM47-207ENST00000593089 ANHXE9PGG2 379 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 TKTP29401 623 aaKnown RBP22.46■■□□□ 1.19
TRIM47-207ENST00000593089 PRPHP41219 470 aa22.46■■□□□ 1.19
TRIM47-207ENST00000593089 NBL1P41271 181 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms