RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 WNT7BP56706 349 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 CAPSQ13938 189 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 CELF3Q5SZQ8 465 aaKnown RBP21.17■□□□□ 0.98
CLIP3-206ENST00000593074 MAP1SQ66K74 1059 aaPredicted RBP21.17■□□□□ 0.98
CLIP3-206ENST00000593074 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.17■□□□□ 0.98
CLIP3-206ENST00000593074 DHX38Q92620 1227 aaKnown RBP21.17■□□□□ 0.98
CLIP3-206ENST00000593074 FAM167AQ96KS9 214 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 FNBP1Q96RU3 617 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 SLITRK6Q9H5Y7 841 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 NFU1Q9UMS0 254 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 SCN4AP35499 1836 aa21.17■□□□□ 0.98
CLIP3-206ENST00000593074 A0A0B4J269 797 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 LOC102724159A0A0B4J2E5 919 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 FAM170AA1A519 330 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 MIF4GDA9UHW6 222 aaKnown RBP21.16■□□□□ 0.98
CLIP3-206ENST00000593074 SART1O43290 800 aaKnown RBP21.16■□□□□ 0.98
CLIP3-206ENST00000593074 PWP2Q15269 919 aaKnown RBP21.16■□□□□ 0.98
CLIP3-206ENST00000593074 MORC4Q8TE76 937 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 GPR20Q99678 358 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 PI4K2AQ9BTU6 479 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 ZMYND15Q9H091 742 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 ALG6Q9Y672 507 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 ADGRA2Q96PE1 1338 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 NOP56O00567 594 aaKnown RBP21.16■□□□□ 0.98
CLIP3-206ENST00000593074 LDHAP00338 332 aaKnown RBP21.16■□□□□ 0.98
CLIP3-206ENST00000593074 C4BPAP04003 597 aaKnown RBP21.16■□□□□ 0.98
CLIP3-206ENST00000593074 CYP1A2P05177 515 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 EDN1P05305 212 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 CETPP11597 493 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 ACOT2P49753 483 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 TDRD10Q5VZ19 366 aaKnown RBP21.16■□□□□ 0.98
CLIP3-206ENST00000593074 DHX37Q8IY37 1157 aaKnown RBP21.16■□□□□ 0.98
CLIP3-206ENST00000593074 TSEN2Q8NCE0 465 aaKnown RBP21.16■□□□□ 0.98
CLIP3-206ENST00000593074 GPRC5AQ8NFJ5 357 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 GLG1Q92896 1179 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 RNPC3Q96LT9 517 aaKnown RBP21.16■□□□□ 0.98
CLIP3-206ENST00000593074 EFCC1Q9HA90 598 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 PRDM4Q9UKN5 801 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 GTF3C4Q9UKN8 822 aa21.16■□□□□ 0.98
CLIP3-206ENST00000593074 PTPRJQ12913 1337 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 ADCY3O60266 1144 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 PHACTR2O75167 634 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 FGGP02679 453 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 POTEJP0CG39 1038 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 ITGA4P13612 1032 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 CCNA1P78396 465 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 MREGQ8N565 214 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 ALG3Q92685 438 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 ELMO3Q96BJ8 720 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 ZBTB45Q96K62 511 aaPredicted RBP21.15■□□□□ 0.98
CLIP3-206ENST00000593074 FAM84AQ96KN4 292 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 RPS6KC1Q96S38 1066 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 TARS2Q9BW92 718 aaKnown RBP21.15■□□□□ 0.98
CLIP3-206ENST00000593074 DDX47Q9H0S4 455 aaKnown RBP21.15■□□□□ 0.98
CLIP3-206ENST00000593074 PLEKHA4Q9H4M7 779 aa21.15■□□□□ 0.98
CLIP3-206ENST00000593074 RBAKQ9NYW8 714 aaPredicted RBP21.15■□□□□ 0.98
CLIP3-206ENST00000593074 ASB14A6NK59 587 aa21.14■□□□□ 0.98
CLIP3-206ENST00000593074 LGR5O75473 907 aa21.14■□□□□ 0.98
CLIP3-206ENST00000593074 HLA-DRAP01903 254 aa21.14■□□□□ 0.98
CLIP3-206ENST00000593074 CLUL1Q15846 466 aa21.14■□□□□ 0.98
CLIP3-206ENST00000593074 HSDL1Q3SXM5 330 aa21.14■□□□□ 0.98
CLIP3-206ENST00000593074 ALS2CLQ60I27 953 aa21.14■□□□□ 0.98
CLIP3-206ENST00000593074 LMBRD2Q68DH5 695 aaPredicted RBP21.14■□□□□ 0.98
CLIP3-206ENST00000593074 FBXO16Q8IX29 292 aaPredicted RBP21.14■□□□□ 0.98
CLIP3-206ENST00000593074 WHAMMQ8TF30 809 aa21.14■□□□□ 0.98
CLIP3-206ENST00000593074 BBXQ8WY36 941 aaPredicted RBP21.14■□□□□ 0.98
CLIP3-206ENST00000593074 IFT81Q8WYA0 676 aa21.14■□□□□ 0.98
CLIP3-206ENST00000593074 NAP1L3Q99457 506 aaPredicted RBP21.14■□□□□ 0.98
CLIP3-206ENST00000593074 SH3GL2Q99962 352 aa21.14■□□□□ 0.98
CLIP3-206ENST00000593074 MSTO1Q9BUK6 570 aa21.14■□□□□ 0.98
CLIP3-206ENST00000593074 PDHXO00330 501 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 FAM153BP0C7A2 387 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 TNNI1P19237 187 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 GTF2A2P52657 109 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 CUL1Q13616 776 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 FAM153CQ494X1 144 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 CCDC62Q6P9F0 684 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 RIN2Q8WYP3 895 aaPredicted RBP21.14■□□□□ 0.97
CLIP3-206ENST00000593074 SPATA33Q96N06 139 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 CGRRF1Q99675 332 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 ANKFY1Q9P2R3 1169 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 UVRAGQ9P2Y5 699 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 FAM153AQ9UHL3 310 aa21.14■□□□□ 0.97
CLIP3-206ENST00000593074 ATMINO43313 823 aaPredicted RBP21.13■□□□□ 0.97
CLIP3-206ENST00000593074 VNN1O95497 513 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 TXNP10599 105 aaKnown RBP21.13■□□□□ 0.97
CLIP3-206ENST00000593074 KRT5P13647 590 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 PIK3CAP42336 1068 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 DRP2Q13474 957 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 CLEC16AQ2KHT3 1053 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 WDR44Q5JSH3 913 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 PLPPR4Q7Z2D5 763 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 MS4A4AQ96JQ5 239 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 ZSWIM1Q9BR11 485 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 FAM204AQ9H8W3 233 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 SLC45A1Q9Y2W3 748 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 CNTNAP2Q9UHC6 1331 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 GAS2O43903 313 aaKnown RBP21.13■□□□□ 0.97
CLIP3-206ENST00000593074 ECHS1P30084 290 aa21.13■□□□□ 0.97
CLIP3-206ENST00000593074 EFNA5P52803 228 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms