RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CASKIN2Q8WXE0 1202 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 TMX3Q96JJ7 454 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 NUP88Q99567 741 aaPredicted RBP4.5□□□□□ -1.69
VMP1-212ENST00000591782 MNTQ99583 582 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 MYOCQ99972 504 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 GTPBP4Q9BZE4 634 aaKnown RBP4.5□□□□□ -1.69
VMP1-212ENST00000591782 SPON1Q9HCB6 807 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 MOCS1Q9NZB8 636 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.5□□□□□ -1.69
VMP1-212ENST00000591782 SLC23A1Q9UHI7 598 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 TSC22D4Q9Y3Q8 395 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 TESMINQ9Y4I5 508 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 PCDHB1Q9Y5F3 818 aa4.5□□□□□ -1.69
VMP1-212ENST00000591782 PNPLA7Q6ZV29 1317 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 PJA2O43164 708 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 SGTAO43765 313 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 DTNBO60941 627 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 RFPL1O75677 317 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 SCGB1D2O95969 90 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 ATP5JP18859 108 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 VCAM1P19320 739 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 MAN2A2P49641 1150 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 CLRN1P58418 232 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 KRTAP10-2P60368 255 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 RAP2BP61225 183 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 DSC2Q02487 901 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 PTH1RQ03431 593 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 CNGB1Q14028 1251 aaPredicted RBP4.49□□□□□ -1.69
VMP1-212ENST00000591782 RRP1BQ14684 758 aaKnown RBP4.49□□□□□ -1.69
VMP1-212ENST00000591782 PPP2R5AQ15172 486 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 VPS72Q15906 364 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 USP39Q53GS9 565 aaKnown RBP4.49□□□□□ -1.69
VMP1-212ENST00000591782 DCAF17Q5H9S7 520 aaPredicted RBP4.49□□□□□ -1.69
VMP1-212ENST00000591782 USP45Q70EL2 814 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 HTR3DQ70Z44 454 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 RSPH3Q86UC2 560 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 PRR18Q8N4B5 295 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 TFAP2CQ92754 450 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 EXTL1Q92935 676 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 CLPTM1LQ96KA5 538 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 CAMKK2Q96RR4 588 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 MRI1Q9BV20 369 aa4.49□□□□□ -1.69
VMP1-212ENST00000591782 PNMA8BQ9ULN7 279 aaPredicted RBP4.49□□□□□ -1.69
VMP1-212ENST00000591782 XDHP47989 1333 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 GOLGA6L6A8MZA4 724 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 PLSCR1O15162 318 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 TEX33O43247 280 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 PRPF3O43395 683 aaKnown RBP4.48□□□□□ -1.69
VMP1-212ENST00000591782 ADRB1P08588 477 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 SNRPA1P09661 255 aaKnown RBP4.48□□□□□ -1.69
VMP1-212ENST00000591782 AKAP5P24588 427 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 PTTG1IPP53801 180 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 ZNF280AP59817 542 aaPredicted RBP4.48□□□□□ -1.69
VMP1-212ENST00000591782 METTL24Q5JXM2 366 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 NAIF1Q69YI7 327 aaPredicted RBP4.48□□□□□ -1.69
VMP1-212ENST00000591782 OTUD7BQ6GQQ9 843 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 PPP4R3AQ6IN85 833 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 EFCAB12Q6NXP0 572 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 PLXDC1Q8IUK5 500 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 SYT12Q8IV01 421 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 DRC7Q8IY82 874 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 CHPFQ8IZ52 775 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 DCBLD1Q8N8Z6 715 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 ZFP28Q8NHY6 868 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 IL17DQ8TAD2 202 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 IFI44Q8TCB0 444 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 NSUN6Q8TEA1 469 aaKnown RBP4.48□□□□□ -1.69
VMP1-212ENST00000591782 SH3RF3Q8TEJ3 882 aaPredicted RBP4.48□□□□□ -1.69
VMP1-212ENST00000591782 MRGPRX4Q96LA9 322 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 LRGUKQ96M69 825 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 NAP1L5Q96NT1 182 aaPredicted RBP4.48□□□□□ -1.69
VMP1-212ENST00000591782 DMRTA2Q96SC8 542 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 TCEAL9Q9UHQ7 104 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 NOB1Q9ULX3 412 aaKnown RBP4.48□□□□□ -1.69
VMP1-212ENST00000591782 CLCA2Q9UQC9 943 aa4.48□□□□□ -1.69
VMP1-212ENST00000591782 CFAP20Q9Y6A4 193 aaKnown RBP4.48□□□□□ -1.69
VMP1-212ENST00000591782 LRRC14BA6NHZ5 514 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 RPLP2P05387 115 aaKnown RBP4.47□□□□□ -1.69
VMP1-212ENST00000591782 CYP2C19P33261 490 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 CTXN1P60606 82 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 TLE1Q04724 770 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 ZNF267Q14586 743 aaPredicted RBP4.47□□□□□ -1.69
VMP1-212ENST00000591782 PGS1Q32NB8 556 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 ATXN7L2Q5T6C5 722 aaPredicted RBP4.47□□□□□ -1.69
VMP1-212ENST00000591782 IFIT1BQ5T764 474 aaKnown RBP4.47□□□□□ -1.69
VMP1-212ENST00000591782 ZNF529Q6P280 563 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 DRICH1Q6PGQ1 229 aaPredicted RBP4.47□□□□□ -1.69
VMP1-212ENST00000591782 SEM1Q6ZVN7 128 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 UBE3BQ7Z3V4 1068 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 SPRED1Q7Z699 444 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 TTC7BQ86TV6 843 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 TMPRSS6Q8IU80 811 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 C1orf210Q8IVY1 113 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 OR10H5Q8NGA6 315 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 HPS3Q969F9 1004 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 GPR20Q99678 358 aa4.47□□□□□ -1.69
VMP1-212ENST00000591782 VRK1Q99986 396 aaPredicted RBP4.47□□□□□ -1.69
VMP1-212ENST00000591782 SLC12A5Q9H2X9 1139 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms