RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 KIAA0319Q5VV43 1072 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 FUT10Q6P4F1 479 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 SYCE2Q6PIF2 218 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 ZPBP2Q6X784 338 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 PPFIBP1Q86W92 1011 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 CEP57Q86XR8 500 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 ADHFE1Q8IWW8 467 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 SMRP1Q8NCR6 262 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 HASPINQ8TF76 798 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 DDX12PQ92771 950 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 B3GALT6Q96L58 329 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 PRKAG3Q9UGI9 489 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 CFAP45Q9UL16 551 aa13.22□□□□□ -0.29
TPM4-212ENST00000590180 USP15Q9Y4E8 981 aaPredicted RBP13.22□□□□□ -0.29
TPM4-212ENST00000590180 ATG2AQ2TAZ0 1938 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 VCANP13611 3396 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 ABLIM1O14639 778 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 CUTAO60888 179 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 LILRB3O75022 631 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 IDEP14735 1019 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 EPCAMP16422 314 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 SCP2P22307 547 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 NOLC1Q14978 699 aaKnown RBP eCLIP13.21□□□□□ -0.29
TPM4-212ENST00000590180 FAM171A1Q5VUB5 890 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 CES5AQ6NT32 575 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 DCLRE1AQ6PJP8 1040 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 C12orf76Q8N812 135 aaPredicted RBP13.21□□□□□ -0.29
TPM4-212ENST00000590180 SLC22A17Q8WUG5 538 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 RIN2Q8WYP3 895 aaPredicted RBP13.21□□□□□ -0.29
TPM4-212ENST00000590180 S1PR5Q9H228 398 aa13.21□□□□□ -0.29
TPM4-212ENST00000590180 MYH11P35749 1972 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 A0A087X0B3 334 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 HNRNPDLO14979 420 aaKnown RBP13.2□□□□□ -0.3
TPM4-212ENST00000590180 TEX28O15482 410 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 B3GAT3O94766 335 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 BRD1O95696 1058 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 MYBP10242 640 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 ME1P48163 572 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 GTF2BQ00403 316 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 DSG1Q02413 1049 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 DNM1Q05193 864 aaKnown RBP13.2□□□□□ -0.3
TPM4-212ENST00000590180 ZP2Q05996 745 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 MCL1Q07820 350 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 NAB2Q15742 525 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 ZC2HC1CQ53FD0 456 aaPredicted RBP13.2□□□□□ -0.3
TPM4-212ENST00000590180 HERC4Q5GLZ8 1057 aaPredicted RBP13.2□□□□□ -0.3
TPM4-212ENST00000590180 RARS2Q5T160 578 aaKnown RBP13.2□□□□□ -0.3
TPM4-212ENST00000590180 ATL3Q6DD88 541 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 KANK3Q6NY19 840 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 ALKAL1Q6UXT8 129 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 SFR1Q86XK3 245 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 PALB2Q86YC2 1186 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 GLYCTKQ8IVS8 523 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 KCNG4Q8TDN1 519 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 STAMQ92783 540 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 RPGRIP1Q96KN7 1286 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 PPP1R10Q96QC0 940 aaKnown RBP13.2□□□□□ -0.3
TPM4-212ENST00000590180 POP1Q99575 1024 aaKnown RBP13.2□□□□□ -0.3
TPM4-212ENST00000590180 MRPL44Q9H9J2 332 aaKnown RBP13.2□□□□□ -0.3
TPM4-212ENST00000590180 CHST7Q9NS84 486 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 SLC38A7Q9NVC3 462 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 DZANK1Q9NVP4 752 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
TPM4-212ENST00000590180 TDRD15B5MCY1 1934 aaKnown RBP13.19□□□□□ -0.3
TPM4-212ENST00000590180 SF3B1O75533 1304 aaKnown RBP eCLIP13.19□□□□□ -0.32e-7■■■■□ 26.7
TPM4-212ENST00000590180 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
TPM4-212ENST00000590180 KIF4AO95239 1232 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 EFEMP2O95967 443 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 ADH1AP07327 375 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 CLTAP09496 248 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 GAP43P17677 238 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 RPL17P18621 184 aaKnown RBP13.19□□□□□ -0.3
TPM4-212ENST00000590180 ABCD1P33897 745 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 CLCNKBP51801 687 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 ELAVL2Q12926 359 aaKnown RBP13.19□□□□□ -0.3
TPM4-212ENST00000590180 CBX2Q14781 532 aaPredicted RBP13.19□□□□□ -0.3
TPM4-212ENST00000590180 SLC10A6Q3KNW5 377 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 XKR4Q5GH76 650 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 ATAT1Q5SQI0 421 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 SHC4Q6S5L8 630 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 ZNF720Q7Z2F6 126 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 RNF168Q8IYW5 571 aaPredicted RBP13.19□□□□□ -0.3
TPM4-212ENST00000590180 IQUBQ8NA54 791 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 DHX58Q96C10 678 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 DNAJC19Q96DA6 116 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 FAM212AQ96EL1 285 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
TPM4-212ENST00000590180 SNX27Q96L92 541 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 FBXL18Q96ME1 805 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 UROC1Q96N76 676 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 ZMAT2Q96NC0 199 aaKnown RBP13.19□□□□□ -0.3
TPM4-212ENST00000590180 TTPALQ9BTX7 342 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 PHF7Q9BWX1 381 aaPredicted RBP13.19□□□□□ -0.3
TPM4-212ENST00000590180 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 ADAM7Q9H2U9 754 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 EPHX3Q9H6B9 360 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 GOLGA2P5Q9HBQ8 144 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 RXFP1Q9HBX9 757 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 FAM13BQ9NYF5 915 aa13.19□□□□□ -0.3
TPM4-212ENST00000590180 PCDHA7Q9UN72 937 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms