RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 KAT2BQ92831 832 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 GPRASP2Q96D09 838 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 LMAN2LQ9H0V9 348 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 TNKS2Q9H2K2 1166 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 RC3H2Q9HBD1 1191 aaKnown RBP9.12□□□□□ -0.95
SMAD4-209ENST00000589941 IGSF5Q9NSI5 407 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 SWAP70Q9UH65 585 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 TTC3P53804 2025 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 MAST4O15021 2626 aa9.12□□□□□ -0.95
SMAD4-209ENST00000589941 PRKAB2O43741 272 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 ZBED4O75132 1171 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 ARIH2O95376 493 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 CD96P40200 585 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 SNAP25P60880 206 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 TNNI3KQ59H18 835 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 ZNF574Q6ZN55 896 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-209ENST00000589941 RASGRP2Q7LDG7 609 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 RBM23Q86U06 439 aaKnown RBP9.11□□□□□ -0.95
SMAD4-209ENST00000589941 CCDC105Q8IYK2 499 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 BCL7CQ8WUZ0 217 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-209ENST00000589941 TOP1MTQ969P6 601 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 CHMP4CQ96CF2 233 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 CCDC74BQ96LY2 380 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 C11orf84Q9BUA3 381 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-209ENST00000589941 APOL5Q9BWW9 433 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 IFIH1Q9BYX4 1025 aaKnown RBP9.11□□□□□ -0.95
SMAD4-209ENST00000589941 CYP39A1Q9NYL5 469 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 DBNLQ9UJU6 430 aaKnown RBP9.11□□□□□ -0.95
SMAD4-209ENST00000589941 PPT2Q9UMR5 302 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 FPGT-TNNI3KV9GXZ4 949 aa9.11□□□□□ -0.95
SMAD4-209ENST00000589941 ADGRA3Q8IWK6 1321 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 PNMA6EA0A0J9YXQ4 647 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 F5H6K3 240 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 WNT11O96014 354 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 ASGR2P07307 311 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 POLR2BP30876 1174 aaKnown RBP9.1□□□□□ -0.95
SMAD4-209ENST00000589941 BMPR1AP36894 532 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 ATXN1P54253 815 aaKnown RBP9.1□□□□□ -0.95
SMAD4-209ENST00000589941 KLRC3Q07444 240 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 MTX1Q13505 466 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 C22orf34Q6ZV56 151 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 C16orf86Q6ZW13 317 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 SESTD1Q86VW0 696 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 RASGRP4Q8TDF6 673 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 TMEM40Q8WWA1 233 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 CRNKL1Q9BZJ0 848 aaKnown RBP9.1□□□□□ -0.95
SMAD4-209ENST00000589941 CCSER2Q9H7U1 834 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 KANSL2Q9H9L4 492 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 HDAC6Q9UBN7 1215 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 EFR3BQ9Y2G0 817 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 CAPN6Q9Y6Q1 641 aa9.1□□□□□ -0.95
SMAD4-209ENST00000589941 MEIS3P2A8K0S8 358 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 C2CD4DB7Z1M9 353 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 RGS13O14921 159 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 UBOX5O94941 541 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 ITGB1P05556 798 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 ADRB1P08588 477 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 ALAS1P13196 640 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 ATF7P17544 494 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-209ENST00000589941 ETV3P41162 512 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 ALDH5A1P51649 535 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-209ENST00000589941 OAZ1P54368 228 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 PPP2R5BQ15173 497 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 PLEKHG4Q58EX7 1191 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 XP32Q5T750 250 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 CDCP2Q5VXM1 449 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 ZNF746Q6NUN9 644 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-209ENST00000589941 NSMFQ6X4W1 530 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 CCDC81Q6ZN84 652 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 VSIG10LQ86VR7 867 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 CERS3Q8IU89 383 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 LRRC47Q8N1G4 583 aaKnown RBP9.09□□□□□ -0.95
SMAD4-209ENST00000589941 MFSD4AQ8N468 514 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 FIBCD1Q8N539 461 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 FLCNQ8NFG4 579 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 RIN2Q8WYP3 895 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-209ENST00000589941 Q96M66 194 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 CNNM2Q9H8M5 875 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 ARMT1Q9H993 441 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 SORCS3Q9UPU3 1222 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 CTDP1Q9Y5B0 961 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-209ENST00000589941 LOC400499M0QZD8 3231 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 IGF2RP11717 2491 aa9.09□□□□□ -0.95
SMAD4-209ENST00000589941 DSPP15924 2871 aaKnown RBP9.09□□□□□ -0.95
SMAD4-209ENST00000589941 AKAP13Q12802 2813 aa9.09□□□□□ -0.96
SMAD4-209ENST00000589941 FLNBO75369 2602 aaKnown RBP9.08□□□□□ -0.96
SMAD4-209ENST00000589941 CACNA1IQ9P0X4 2223 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 MYH6P13533 1939 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 PER2O15055 1255 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 LRRN2O75325 713 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 PARNO95453 639 aaKnown RBP9.08□□□□□ -0.96
SMAD4-209ENST00000589941 CHGBP05060 677 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 MMP3P08254 477 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 ZNF286BP0CG31 522 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 PDE6AP16499 860 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 AOC1P19801 751 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 CCDC158Q5M9N0 1113 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 C12orf60Q5U649 245 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 SLC30A10Q6XR72 485 aa9.08□□□□□ -0.96
SMAD4-209ENST00000589941 NLRC3Q7RTR2 1065 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms