RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 TTLL13PA6NNM8 815 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 STK25O00506 426 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 ST18O60284 1047 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 PAPLNO95428 1278 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 HNRNPA1P09651 372 aaKnown RBP eCLIP23.18■■□□□ 1.3
TMC6-213ENST00000589933 PRPHP41219 470 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 RTP2Q5QGT7 225 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 PPM1LQ5SGD2 360 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.18■■□□□ 1.3
TMC6-213ENST00000589933 DTHD1Q6ZMT9 781 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 C4orf32Q8N8J7 132 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 IGSF22Q8N9C0 903 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 ZNF707Q96C28 371 aaPredicted RBP23.18■■□□□ 1.3
TMC6-213ENST00000589933 PAAF1Q9BRP4 392 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 FAM86C1Q9NVL1 165 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 CACNG4Q9UBN1 327 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 WNT16Q9UBV4 365 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 TNFSF13BQ9Y275 285 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 RBM19Q9Y4C8 960 aaKnown RBP23.18■■□□□ 1.3
TMC6-213ENST00000589933 VWA8A3KMH1 1905 aa23.18■■□□□ 1.3
TMC6-213ENST00000589933 XYLBO75191 536 aa23.17■■□□□ 1.3
TMC6-213ENST00000589933 CENPBP07199 599 aaPredicted RBP23.17■■□□□ 1.3
TMC6-213ENST00000589933 EEF1DP3Q658K8 133 aa23.17■■□□□ 1.3
TMC6-213ENST00000589933 DCLRE1AQ6PJP8 1040 aa23.17■■□□□ 1.3
TMC6-213ENST00000589933 GET4Q7L5D6 327 aaPredicted RBP23.17■■□□□ 1.3
TMC6-213ENST00000589933 SIX5Q8N196 739 aa23.17■■□□□ 1.3
TMC6-213ENST00000589933 KIFC3Q9BVG8 833 aa23.17■■□□□ 1.3
TMC6-213ENST00000589933 TIPINQ9BVW5 301 aa23.17■■□□□ 1.3
TMC6-213ENST00000589933 MRPL4Q9BYD3 311 aaKnown RBP23.17■■□□□ 1.3
TMC6-213ENST00000589933 TMEM134Q9H6X4 195 aa23.17■■□□□ 1.3
TMC6-213ENST00000589933 C17orf75Q9HAS0 396 aa23.17■■□□□ 1.3
TMC6-213ENST00000589933 SLC38A7Q9NVC3 462 aa23.17■■□□□ 1.3
TMC6-213ENST00000589933 FBXW11Q9UKB1 542 aa23.17■■□□□ 1.3
TMC6-213ENST00000589933 TMEM189-UBE2V1I3L0A0 370 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 GFRA3O60609 400 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 B3GAT3O94766 335 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 LAMP2P13473 410 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 AOC1P19801 751 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 PEX3P56589 373 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 NBR1Q14596 966 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 ECM1Q16610 540 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 MCTP1Q6DN14 999 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 LNX1Q8TBB1 728 aaPredicted RBP23.16■■□□□ 1.3
TMC6-213ENST00000589933 MYADMQ96S97 322 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 TCHPQ9BT92 498 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 KMT5AQ9NQR1 393 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 PCDHB6Q9Y5E3 794 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 CACNA1HO95180 2353 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 DOCK6Q96HP0 2047 aa23.16■■□□□ 1.3
TMC6-213ENST00000589933 N4BP1O75113 896 aaKnown RBP23.15■■□□□ 1.3
TMC6-213ENST00000589933 SRFP11831 508 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 FSHRP23945 695 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 HOXA9P31269 272 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 RABEP1Q15276 862 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 ZNF568Q3ZCX4 644 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 RILPL1Q5EBL4 403 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 NT5DC1Q5TFE4 455 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 KCTD17Q8N5Z5 321 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 DDX27Q96GQ7 796 aaKnown RBP23.15■■□□□ 1.3
TMC6-213ENST00000589933 CLSTN3Q9BQT9 956 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 POLD4Q9HCU8 107 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 USP20Q9Y2K6 914 aa23.15■■□□□ 1.3
TMC6-213ENST00000589933 E9PMD0 336 aa23.14■■□□□ 1.29
TMC6-213ENST00000589933 C8AP07357 584 aa23.14■■□□□ 1.29
TMC6-213ENST00000589933 CFHP08603 1231 aa23.14■■□□□ 1.29
TMC6-213ENST00000589933 GRM5P41594 1212 aa23.14■■□□□ 1.29
TMC6-213ENST00000589933 NPTX2P47972 431 aa23.14■■□□□ 1.29
TMC6-213ENST00000589933 UVSSAQ2YD98 709 aa23.14■■□□□ 1.29
TMC6-213ENST00000589933 GLRA4Q5JXX5 417 aa23.14■■□□□ 1.29
TMC6-213ENST00000589933 RTL10Q7L3V2 364 aa23.14■■□□□ 1.29
TMC6-213ENST00000589933 SLC44A3Q8N4M1 653 aa23.14■■□□□ 1.29
TMC6-213ENST00000589933 PPP1R10Q96QC0 940 aaKnown RBP23.14■■□□□ 1.29
TMC6-213ENST00000589933 POLIQ9UNA4 740 aa23.14■■□□□ 1.29
TMC6-213ENST00000589933 HIP1RO75146 1068 aa23.13■■□□□ 1.29
TMC6-213ENST00000589933 TOB1P50616 345 aaPredicted RBP23.13■■□□□ 1.29
TMC6-213ENST00000589933 SMTNP53814 917 aa23.13■■□□□ 1.29
TMC6-213ENST00000589933 STRN3Q13033 797 aa23.13■■□□□ 1.29
TMC6-213ENST00000589933 ZRSR1Q15695 479 aaKnown RBP23.13■■□□□ 1.29
TMC6-213ENST00000589933 NAB2Q15742 525 aa23.13■■□□□ 1.29
TMC6-213ENST00000589933 ANKS3Q6ZW76 656 aa23.13■■□□□ 1.29
TMC6-213ENST00000589933 RSAD2Q8WXG1 361 aa23.13■■□□□ 1.29
TMC6-213ENST00000589933 CDK5RAP3Q96JB5 506 aa23.13■■□□□ 1.29
TMC6-213ENST00000589933 ACO2Q99798 780 aaKnown RBP23.13■■□□□ 1.29
TMC6-213ENST00000589933 UPF2Q9HAU5 1272 aaKnown RBP23.13■■□□□ 1.29
TMC6-213ENST00000589933 H3BQV1 296 aa23.12■■□□□ 1.29
TMC6-213ENST00000589933 EDN1P05305 212 aa23.12■■□□□ 1.29
TMC6-213ENST00000589933 FGFR3P22607 806 aa23.12■■□□□ 1.29
TMC6-213ENST00000589933 OR1D2P34982 312 aa23.12■■□□□ 1.29
TMC6-213ENST00000589933 CLCNKBP51801 687 aa23.12■■□□□ 1.29
TMC6-213ENST00000589933 RAB33AQ14088 237 aa23.12■■□□□ 1.29
TMC6-213ENST00000589933 CWF19L1Q69YN2 538 aaKnown RBP23.12■■□□□ 1.29
TMC6-213ENST00000589933 RINT1Q6NUQ1 792 aa23.12■■□□□ 1.29
TMC6-213ENST00000589933 MTSS1LQ765P7 747 aa23.12■■□□□ 1.29
TMC6-213ENST00000589933 GRASPQ7Z6J2 395 aaPredicted RBP23.12■■□□□ 1.29
TMC6-213ENST00000589933 ACAP3Q96P50 834 aa23.12■■□□□ 1.29
TMC6-213ENST00000589933 KIF2CQ99661 725 aa23.12■■□□□ 1.29
TMC6-213ENST00000589933 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.12■■□□□ 1.29
TMC6-213ENST00000589933 SMIM28A0A1B0GU29 152 aa23.11■■□□□ 1.29
TMC6-213ENST00000589933 PROB1E7EW31 1015 aa23.11■■□□□ 1.29
TMC6-213ENST00000589933 NARSO43776 548 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms