RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 XKR4Q5GH76 650 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 RTP2Q5QGT7 225 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 ARL6IP4Q66PJ3 421 aaKnown RBP12.26□□□□□ -0.45
DDX39A-210ENST00000589675 RINT1Q6NUQ1 792 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 DCLRE1AQ6PJP8 1040 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 ALKAL1Q6UXT8 129 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 ALYREFQ86V81 257 aaKnown RBP12.26□□□□□ -0.45
DDX39A-210ENST00000589675 PALB2Q86YC2 1186 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 LNX1Q8TBB1 728 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-210ENST00000589675 RABGGTAQ92696 567 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 NXPE3Q969Y0 559 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 TMX3Q96JJ7 454 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 B3GALT6Q96L58 329 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 UROC1Q96N76 676 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 PPP1R10Q96QC0 940 aaKnown RBP12.26□□□□□ -0.45
DDX39A-210ENST00000589675 ACO2Q99798 780 aaKnown RBP12.26□□□□□ -0.45
DDX39A-210ENST00000589675 KIFC3Q9BVG8 833 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 PRKD2Q9BZL6 878 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 CXCL16Q9H2A7 254 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 POLD4Q9HCU8 107 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 PTPRHQ9HD43 1115 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 EPS15L1Q9UBC2 864 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 USP20Q9Y2K6 914 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 ZFHX2Q9C0A1 2572 aaPredicted RBP12.26□□□□□ -0.45
DDX39A-210ENST00000589675 CLUHO75153 1309 aa12.26□□□□□ -0.45
DDX39A-210ENST00000589675 CASTOR2A6NHX0 329 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 PP2D1A8MPX8 630 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 SLC26A4O43511 780 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 N4BP1O75113 896 aaKnown RBP12.25□□□□□ -0.45
DDX39A-210ENST00000589675 HIP1RO75146 1068 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 RFPL2O75678 378 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 ZMYND10O75800 440 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 PDGFBP01127 241 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-210ENST00000589675 LIG1P18858 919 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 PROZP22891 400 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 GRM5P41594 1212 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 MRE11P49959 708 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 CLCN5P51795 746 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 MAPK7Q13164 816 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 FAM171A1Q5VUB5 890 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 MCTP1Q6DN14 999 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-210ENST00000589675 RTL10Q7L3V2 364 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 SPIRE2Q8WWL2 714 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 SMG7Q92540 1137 aaKnown RBP12.25□□□□□ -0.45
DDX39A-210ENST00000589675 CLSTN3Q9BQT9 956 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 MRPL4Q9BYD3 311 aaKnown RBP12.25□□□□□ -0.45
DDX39A-210ENST00000589675 KCNK12Q9HB15 430 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 KMT5AQ9NQR1 393 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 TOPORSQ9NS56 1045 aaPredicted RBP12.25□□□□□ -0.45
DDX39A-210ENST00000589675 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■■■□ 20.4
DDX39A-210ENST00000589675 KCND2Q9NZV8 630 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 CACNG4Q9UBN1 327 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 FBXW11Q9UKB1 542 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 DUSP12Q9UNI6 340 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 GDAQ9Y2T3 454 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 CFAP54Q96N23 3096 aa12.25□□□□□ -0.45
DDX39A-210ENST00000589675 PDCD11Q14690 1871 aaKnown RBP12.25□□□□□ -0.45
DDX39A-210ENST00000589675 CCDC169A6NNP5 214 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 TRAPPC3O43617 180 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 POU2F2P09086 479 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 HNRNPA1P09651 372 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX39A-210ENST00000589675 SPATA31D3P0C874 917 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 MCF2P10911 925 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 RPL17P18621 184 aaKnown RBP12.24□□□□□ -0.45
DDX39A-210ENST00000589675 FGFR3P22607 806 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 GJB2P29033 226 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 CDC25AP30304 524 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 HOXA9P31269 272 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 PSMD5Q16401 504 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 UPP1Q16831 310 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 ASTLQ6HA08 431 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-210ENST00000589675 PRSS55Q6UWB4 352 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-210ENST00000589675 SPATA31D4Q6ZUB0 917 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 TAS1R3Q7RTX0 852 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 KCNK18Q7Z418 384 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 SYT2Q8N9I0 419 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-210ENST00000589675 KCNN1Q92952 543 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 DDX27Q96GQ7 796 aaKnown RBP12.24□□□□□ -0.45
DDX39A-210ENST00000589675 RUSC1Q9BVN2 902 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 CCDC94Q9BW85 323 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-210ENST00000589675 CDT1Q9H211 546 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 SMOC2Q9H3U7 446 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 UPF2Q9HAU5 1272 aaKnown RBP12.24□□□□□ -0.45
DDX39A-210ENST00000589675 SLC38A7Q9NVC3 462 aa12.24□□□□□ -0.45
DDX39A-210ENST00000589675 ZFP37Q9Y6Q3 630 aaPredicted RBP12.24□□□□□ -0.45
DDX39A-210ENST00000589675 SMIM28A0A1B0GU29 152 aa12.23□□□□□ -0.45
DDX39A-210ENST00000589675 H3BQV1 296 aa12.23□□□□□ -0.45
DDX39A-210ENST00000589675 ABLIM1O14639 778 aa12.23□□□□□ -0.45
DDX39A-210ENST00000589675 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
DDX39A-210ENST00000589675 B3GAT3O94766 335 aa12.23□□□□□ -0.45
DDX39A-210ENST00000589675 CD2BP2O95400 341 aaKnown RBP12.23□□□□□ -0.45
DDX39A-210ENST00000589675 KCNE1P15382 129 aa12.23□□□□□ -0.45
DDX39A-210ENST00000589675 SMTNP53814 917 aa12.23□□□□□ -0.45
DDX39A-210ENST00000589675 YARSP54577 528 aaKnown RBP12.23□□□□□ -0.45
DDX39A-210ENST00000589675 SLC12A3P55017 1021 aa12.23□□□□□ -0.45
DDX39A-210ENST00000589675 RAB33AQ14088 237 aa12.23□□□□□ -0.45
DDX39A-210ENST00000589675 UVSSAQ2YD98 709 aa12.23□□□□□ -0.45
DDX39A-210ENST00000589675 CD300LGQ6UXG3 332 aa12.23□□□□□ -0.45
DDX39A-210ENST00000589675 CEP57Q86XR8 500 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms