RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 METTL14Q9HCE5 456 aaKnown RBP13.23□□□□□ -0.29
DNMT1-218ENST00000589294 RBAKQ9NYW8 714 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-218ENST00000589294 DERAQ9Y315 318 aa13.23□□□□□ -0.29
DNMT1-218ENST00000589294 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-218ENST00000589294 MEIS3P2A8K0S8 358 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 LACTBL1A8MY62 500 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 GJB5O95377 273 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 EPB41P11171 864 aaKnown RBP13.22□□□□□ -0.29
DNMT1-218ENST00000589294 CASP4P49662 377 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 MYL5Q02045 173 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 CYP24A1Q07973 514 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 PSMD6Q15008 389 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 NOMO2Q5JPE7 1267 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 CLLU1OSQ5K130 101 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 INTS8Q75QN2 995 aaKnown RBP13.22□□□□□ -0.29
DNMT1-218ENST00000589294 NT5DC4Q86YG4 428 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 BRSK2Q8IWQ3 736 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 FAM186BQ8IYM0 893 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 ABI1Q8IZP0 508 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 ZSWIM2Q8NEG5 633 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 URGCPQ8TCY9 931 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 TMC2Q8TDI7 906 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 ZNF689Q96CS4 500 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-218ENST00000589294 BORCS6Q96GS4 357 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 SNX27Q96L92 541 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 GAD1Q99259 594 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 RAD9AQ99638 391 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 ZBED2Q9BTP6 218 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 PRO3102Q9H379 93 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 THAP9Q9H5L6 903 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 RNF19AQ9NV58 838 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 KLK14Q9P0G3 267 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 CNTN3Q9P232 1028 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 INSL6Q9Y581 213 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 MICAL3Q7RTP6 2002 aa13.22□□□□□ -0.29
DNMT1-218ENST00000589294 SMIM28A0A1B0GU29 152 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 THP07101 528 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 CXCL8P10145 99 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 FGFR1P11362 822 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 KRT13P13646 458 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 IBSPP21815 317 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-218ENST00000589294 MARSP56192 900 aaKnown RBP13.21□□□□□ -0.29
DNMT1-218ENST00000589294 CLDN10P78369 228 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 HTRA4P83105 476 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-218ENST00000589294 PPP2R3AQ06190 1150 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 FAM114A1Q8IWE2 563 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 TDHQ8IZJ6 230 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 GSTCDQ8NEC7 633 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 HELQQ8TDG4 1101 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 PARD3BQ8TEW8 1205 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 CACTINQ8WUQ7 758 aaKnown RBP13.21□□□□□ -0.29
DNMT1-218ENST00000589294 EEF2KMTQ96G04 330 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 CASD1Q96PB1 797 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 ARMCX3Q9UH62 379 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-218ENST00000589294 C2CD2Q9Y426 696 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 NFE2L3Q9Y4A8 694 aa13.21□□□□□ -0.29
DNMT1-218ENST00000589294 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-218ENST00000589294 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-218ENST00000589294 A0A1W2PPC1 479 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 BECN2A8MW95 431 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 MEFVO15553 781 aaPredicted RBP13.2□□□□□ -0.3
DNMT1-218ENST00000589294 XPOTO43592 962 aaKnown RBP13.2□□□□□ -0.3
DNMT1-218ENST00000589294 MLH1P40692 756 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 AP3M2P53677 418 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 NCAPHQ15003 741 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 IQCB1Q15051 598 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 ZBTB6Q15916 424 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 DUOXA2Q1HG44 320 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 IRF2BP1Q8IU81 584 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 CMTR2Q8IYT2 770 aaKnown RBP13.2□□□□□ -0.3
DNMT1-218ENST00000589294 FAM212AQ96EL1 285 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 ZFP42Q96MM3 310 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 FNBP1Q96RU3 617 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 YME1L1Q96TA2 773 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 MRPL9Q9BYD2 267 aaKnown RBP13.2□□□□□ -0.3
DNMT1-218ENST00000589294 RC3H2Q9HBD1 1191 aaKnown RBP13.2□□□□□ -0.3
DNMT1-218ENST00000589294 PDE11AQ9HCR9 933 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 SLC38A7Q9NVC3 462 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 MIOSQ9NXC5 875 aa13.2□□□□□ -0.3
DNMT1-218ENST00000589294 RANBP2P49792 3224 aaKnown RBP13.19□□□□□ -0.3
DNMT1-218ENST00000589294 CARNS1A5YM72 827 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 TBKBP1A7MCY6 615 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 PTGESO14684 152 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 TLL1O43897 1013 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 STX10O60499 249 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 PRKCSHP14314 528 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-218ENST00000589294 CYP3A5P20815 502 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 EEF1GP26641 437 aaKnown RBP13.19□□□□□ -0.3
DNMT1-218ENST00000589294 GTF2H1P32780 548 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 VAMP7P51809 220 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 AFF1P51825 1210 aaKnown RBP13.19□□□□□ -0.3
DNMT1-218ENST00000589294 BFSP1Q12934 665 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 GRIK3Q13003 919 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 CCDC40Q4G0X9 1142 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 FAM117BQ6P1L5 589 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
DNMT1-218ENST00000589294 TMCO2Q7Z6W1 182 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-218ENST00000589294 DHX40Q8IX18 779 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms