RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 ADAM7Q9H2U9 754 aa21.05■□□□□ 0.96
CIRBP-221ENST00000589161 ZHX3Q9H4I2 956 aa21.05■□□□□ 0.96
CIRBP-221ENST00000589161 SF3B1O75533 1304 aaKnown RBP eCLIP21.04■□□□□ 0.96
CIRBP-221ENST00000589161 SMIM28A0A1B0GU29 152 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 PI4K2BG5E9Z4 385 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 SPTLC2O15270 562 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 CLDN3O15551 220 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 ADH1AP07327 375 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 ZSCAN22P10073 491 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-221ENST00000589161 EPCAMP16422 314 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 CBX2Q14781 532 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-221ENST00000589161 NOLC1Q14978 699 aaKnown RBP eCLIP21.04■□□□□ 0.96
CIRBP-221ENST00000589161 XKR4Q5GH76 650 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 ALKAL1Q6UXT8 129 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 SV2BQ7L1I2 683 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 CEP120Q8N960 986 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 BICD1Q96G01 975 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 ZBTB45Q96K62 511 aaPredicted RBP21.04■□□□□ 0.96
CIRBP-221ENST00000589161 UROC1Q96N76 676 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 PAAF1Q9BRP4 392 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 APOL5Q9BWW9 433 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 RXFP1Q9HBX9 757 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.04■□□□□ 0.96
CIRBP-221ENST00000589161 SLC38A7Q9NVC3 462 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 ANKFY1Q9P2R3 1169 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 TFIP11Q9UBB9 837 aaKnown RBP21.04■□□□□ 0.96
CIRBP-221ENST00000589161 TBX20Q9UMR3 447 aa21.04■□□□□ 0.96
CIRBP-221ENST00000589161 TDRD15B5MCY1 1934 aaKnown RBP21.04■□□□□ 0.96
CIRBP-221ENST00000589161 K7ENM7 598 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 PPP6R2O75170 966 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 HARSP12081 509 aaKnown RBP21.03■□□□□ 0.96
CIRBP-221ENST00000589161 ALADP13716 330 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 CLCN4P51793 760 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 CREMQ03060 361 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 MCL1Q07820 350 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 ELAVL2Q12926 359 aaKnown RBP21.03■□□□□ 0.96
CIRBP-221ENST00000589161 GLRA4Q5JXX5 417 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 FBXL18Q96ME1 805 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 NECTIN4Q96NY8 510 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 EPHX3Q9H6B9 360 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 CACNG4Q9UBN1 327 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 DPP7Q9UHL4 492 aa21.03■□□□□ 0.96
CIRBP-221ENST00000589161 TEX28O15482 410 aa21.02■□□□□ 0.96
CIRBP-221ENST00000589161 KIF4AO95239 1232 aa21.02■□□□□ 0.96
CIRBP-221ENST00000589161 YEATS4O95619 227 aa21.02■□□□□ 0.96
CIRBP-221ENST00000589161 C1RP00736 705 aa21.02■□□□□ 0.96
CIRBP-221ENST00000589161 MATR3P43243 847 aaKnown RBP eCLIP21.02■□□□□ 0.96
CIRBP-221ENST00000589161 LIG4P49917 911 aa21.02■□□□□ 0.96
CIRBP-221ENST00000589161 FOXD4L5Q5VV16 416 aaPredicted RBP21.02■□□□□ 0.96
CIRBP-221ENST00000589161 ELMSAN1Q6PJG2 1045 aa21.02■□□□□ 0.96
CIRBP-221ENST00000589161 DCLRE1AQ6PJP8 1040 aa21.02■□□□□ 0.96
CIRBP-221ENST00000589161 FOXD4L4Q8WXT5 416 aaPredicted RBP21.02■□□□□ 0.96
CIRBP-221ENST00000589161 RIN2Q8WYP3 895 aaPredicted RBP21.02■□□□□ 0.96
CIRBP-221ENST00000589161 KHSRPQ92945 711 aaKnown RBP eCLIP21.02■□□□□ 0.96
CIRBP-221ENST00000589161 DDX27Q96GQ7 796 aaKnown RBP21.02■□□□□ 0.96
CIRBP-221ENST00000589161 SNX27Q96L92 541 aa21.02■□□□□ 0.96
CIRBP-221ENST00000589161 RIPOR3Q96MK2 946 aa21.02■□□□□ 0.96
CIRBP-221ENST00000589161 FNIP2Q9P278 1114 aa21.02■□□□□ 0.96
CIRBP-221ENST00000589161 SPDYE4A6NLX3 237 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 LOC730098B7Z3J9 87 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 TMEM189-UBE2V1I3L0A0 370 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 F13A1P00488 732 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 KCNE1P15382 129 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 STAT6P42226 847 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 MTHFRP42898 656 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 GTF2BQ00403 316 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 KYAT1Q16773 422 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 ATAT1Q5SQI0 421 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 RARS2Q5T160 578 aaKnown RBP21.01■□□□□ 0.95
CIRBP-221ENST00000589161 ATL3Q6DD88 541 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 DYMQ7RTS9 669 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 SPRYD3Q8NCJ5 442 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 HASPINQ8TF76 798 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 DDX12PQ92771 950 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 B3GALT6Q96L58 329 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 TTPALQ9BTX7 342 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 PANK2Q9BZ23 570 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 CNTN3Q9P232 1028 aa21.01■□□□□ 0.95
CIRBP-221ENST00000589161 HNRNPDLO14979 420 aaKnown RBP21■□□□□ 0.95
CIRBP-221ENST00000589161 B3GAT3O94766 335 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 PIGRP01833 764 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 CLTAP09496 248 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 UPP1Q16831 310 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 FAM171A1Q5VUB5 890 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 PDXDC1Q6P996 788 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 C12orf76Q8N812 135 aaPredicted RBP21■□□□□ 0.95
CIRBP-221ENST00000589161 RPGRIP1Q96KN7 1286 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 FIZ1Q96SL8 496 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 ST6GALNAC4Q9H4F1 302 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 SFXN1Q9H9B4 322 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 PLEKHA5Q9HAU0 1116 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 SEL1LQ9UBV2 794 aa21■□□□□ 0.95
CIRBP-221ENST00000589161 MYMKA6NI61 221 aa20.99■□□□□ 0.95
CIRBP-221ENST00000589161 DCXO43602 365 aa20.99■□□□□ 0.95
CIRBP-221ENST00000589161 TRAPPC3O43617 180 aa20.99■□□□□ 0.95
CIRBP-221ENST00000589161 CUTAO60888 179 aa20.99■□□□□ 0.95
CIRBP-221ENST00000589161 GLUD1P00367 558 aa20.99■□□□□ 0.95
CIRBP-221ENST00000589161 GAP43P17677 238 aa20.99■□□□□ 0.95
CIRBP-221ENST00000589161 NMT1P30419 496 aaKnown RBP20.99■□□□□ 0.95
CIRBP-221ENST00000589161 CLCNKBP51801 687 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms