RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 CGRRF1Q99675 332 aa15.72■□□□□ 0.11
NPC1-207ENST00000588867 TMEM117Q9H0C3 514 aa15.72■□□□□ 0.11
NPC1-207ENST00000588867 FAM105AQ9NUU6 356 aa15.72■□□□□ 0.11
NPC1-207ENST00000588867 TBX21Q9UL17 535 aa15.72■□□□□ 0.11
NPC1-207ENST00000588867 N4BP1O75113 896 aaKnown RBP15.71■□□□□ 0.11
NPC1-207ENST00000588867 IL18RAPO95256 599 aa15.71■□□□□ 0.11
NPC1-207ENST00000588867 PTMAP06454 111 aaKnown RBP15.71■□□□□ 0.11
NPC1-207ENST00000588867 MXI1P50539 228 aa15.71■□□□□ 0.11
NPC1-207ENST00000588867 MCCD1P59942 119 aaPredicted RBP15.71■□□□□ 0.11
NPC1-207ENST00000588867 CETN1Q12798 172 aa15.71■□□□□ 0.11
NPC1-207ENST00000588867 KRT39Q6A163 491 aa15.71■□□□□ 0.11
NPC1-207ENST00000588867 GBP6Q6ZN66 633 aa15.71■□□□□ 0.11
NPC1-207ENST00000588867 SMG8Q8ND04 991 aaKnown RBP15.71■□□□□ 0.11
NPC1-207ENST00000588867 CPLX3Q8WVH0 158 aa15.71■□□□□ 0.11
NPC1-207ENST00000588867 PPP1R9BQ96SB3 815 aa15.71■□□□□ 0.11
NPC1-207ENST00000588867 WNT8AQ9H1J5 351 aa15.71■□□□□ 0.11
NPC1-207ENST00000588867 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
NPC1-207ENST00000588867 PTPRJQ12913 1337 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 TFAMQ00059 246 aaKnown RBP15.7■□□□□ 0.1
NPC1-207ENST00000588867 ENPEPQ07075 957 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 DSC3Q14574 896 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 GPNMBQ14956 572 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 EXOC3L4Q17RC7 722 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 SV2AQ7L0J3 742 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 TMEM8AQ9HCN3 771 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 FAM207AQ9NSI2 230 aaPredicted RBP15.7■□□□□ 0.1
NPC1-207ENST00000588867 KLK14Q9P0G3 267 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 GCNT4Q9P109 453 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 TTC26A0AVF1 554 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 GOLGA6L6A8MZA4 724 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 MEFVO15553 781 aaPredicted RBP15.7■□□□□ 0.1
NPC1-207ENST00000588867 RECQL4O94761 1208 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 SLC9A1P19634 815 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 GTF2H1P32780 548 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 CLDN10P78369 228 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 POU5F1Q01860 360 aaKnown RBP15.7■□□□□ 0.1
NPC1-207ENST00000588867 BIRC3Q13489 604 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 DEFB128Q7Z7B8 93 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 UBE2Q1Q7Z7E8 422 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 PPFIBP1Q86W92 1011 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 WDR49Q8IV35 697 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 HACE1Q8IYU2 909 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 RNF169Q8NCN4 708 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 DBF4BQ8NFT6 615 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 OR5B17Q8NGF7 314 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 LSM14BQ9BX40 385 aaKnown RBP15.7■□□□□ 0.1
NPC1-207ENST00000588867 SIK3Q9Y2K2 1263 aa15.7■□□□□ 0.1
NPC1-207ENST00000588867 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.7■□□□□ 0.1
NPC1-207ENST00000588867 CITO14578 2027 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 GTPBP10A4D1E9 387 aaKnown RBP15.69■□□□□ 0.1
NPC1-207ENST00000588867 PHACTR2O75167 634 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 ITGA4P13612 1032 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 TRIM21P19474 475 aaKnown RBP15.69■□□□□ 0.1
NPC1-207ENST00000588867 DUOXA2Q1HG44 320 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 PLEKHG4Q58EX7 1191 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 JADE1Q6IE81 842 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 SEPT8Q92599 483 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 ASB7Q9H672 318 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 ANK1P16157 1881 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 SCN5AQ14524 2016 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 ITIH6Q6UXX5 1313 aa15.69■□□□□ 0.1
NPC1-207ENST00000588867 TRIM43BA6NCK2 446 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 P4HA2O15460 535 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 PARNO95453 639 aaKnown RBP15.68■□□□□ 0.1
NPC1-207ENST00000588867 C4BPAP04003 597 aaKnown RBP15.68■□□□□ 0.1
NPC1-207ENST00000588867 NFICP08651 508 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 TMEM191BP0C7N4 346 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 ACTN1P12814 892 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 RAG1P15918 1043 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 PON1P27169 355 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 APBA1Q02410 837 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 COL13A1Q5TAT6 717 aaPredicted RBP15.68■□□□□ 0.1
NPC1-207ENST00000588867 CCDC186Q7Z3E2 898 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 RTN4RL1Q86UN2 441 aaPredicted RBP15.68■□□□□ 0.1
NPC1-207ENST00000588867 CD302Q8IX05 232 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 EFCAB13Q8IY85 973 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 NEK11Q8NG66 645 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 LPPQ93052 612 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 TRIM43Q96BQ3 446 aaPredicted RBP15.68■□□□□ 0.1
NPC1-207ENST00000588867 FTHL17Q9BXU8 183 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 MTMR12Q9C0I1 747 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 CXCL16Q9H2A7 254 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 PLEKHA5Q9HAU0 1116 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.68■□□□□ 0.1
NPC1-207ENST00000588867 RGS18Q9NS28 235 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 RNF19AQ9NV58 838 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 IMPACTQ9P2X3 320 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 TRIP11Q15643 1979 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 A0A0U1RQF3 1178 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 MEIS3P2A8K0S8 358 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 TNNC2P02585 160 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 RAB27AP51159 221 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 AP3M2P53677 418 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 TMEM132DQ14C87 1099 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 TDRD10Q5VZ19 366 aaKnown RBP15.68■□□□□ 0.1
NPC1-207ENST00000588867 EHBP1Q8NDI1 1231 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 FBXL13Q8NEE6 735 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 TAS1R2Q8TE23 839 aa15.68■□□□□ 0.1
NPC1-207ENST00000588867 CACTINQ8WUQ7 758 aaKnown RBP15.68■□□□□ 0.1
NPC1-207ENST00000588867 KIF12Q96FN5 646 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms