RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 KIF4AO95239 1232 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 KRT18P05783 430 aaKnown RBP15.83■□□□□ 0.12
DDX39A-208ENST00000588692 MARCKSP29966 332 aaPredicted RBP15.83■□□□□ 0.12
DDX39A-208ENST00000588692 ABCD1P33897 745 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 ZNF131P52739 623 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 XKR4Q5GH76 650 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 RARS2Q5T160 578 aaKnown RBP15.83■□□□□ 0.12
DDX39A-208ENST00000588692 LRRC15Q8TF66 581 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 RPGRIP1Q96KN7 1286 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 PAAF1Q9BRP4 392 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 PARVGQ9HBI0 331 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 C11orf16Q9NQ32 467 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 FNIP2Q9P278 1114 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 STK17AQ9UEE5 414 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 NR2E1Q9Y466 385 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.12
DDX39A-208ENST00000588692 PDCD11Q14690 1871 aaKnown RBP15.82■□□□□ 0.12
DDX39A-208ENST00000588692 MTCL1Q9Y4B5 1905 aaKnown RBP15.82■□□□□ 0.12
DDX39A-208ENST00000588692 NPHP3-ACAD11A0A0J9YXS1 232 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 TMEM189-UBE2V1I3L0A0 370 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 TBCAO75347 108 aaKnown RBP15.82■□□□□ 0.12
DDX39A-208ENST00000588692 FAM13AO94988 1023 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 GLUD1P00367 558 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 DDIT3P35638 169 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 CACNB1Q02641 598 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-208ENST00000588692 DHX8Q14562 1220 aaKnown RBP15.82■□□□□ 0.12
DDX39A-208ENST00000588692 MCM6Q14566 821 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 NOLC1Q14978 699 aaKnown RBP eCLIP15.82■□□□□ 0.12
DDX39A-208ENST00000588692 ATAT1Q5SQI0 421 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 FAM173BQ6P4H8 233 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 PDXDC1Q6P996 788 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 HAUS6Q7Z4H7 955 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 ZBTB33Q86T24 672 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 CEP120Q8N960 986 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 RABGGTAQ92696 567 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 EPSTI1Q96J88 318 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 SNX27Q96L92 541 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 ACAP3Q96P50 834 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 LRFN3Q9BTN0 628 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 CXCL16Q9H2A7 254 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 SLC38A7Q9NVC3 462 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 ANKFY1Q9P2R3 1169 aa15.82■□□□□ 0.12
DDX39A-208ENST00000588692 SMIM28A0A1B0GU29 152 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 PRR33A8MZF0 331 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 KCNE1P15382 129 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 COL9A1P20849 921 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 OSTNP61366 133 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 CEBPZQ03701 1054 aaKnown RBP15.81■□□□□ 0.12
DDX39A-208ENST00000588692 SLC39A14Q15043 492 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 GLRA4Q5JXX5 417 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 ALKAL1Q6UXT8 129 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 C15orf39Q6ZRI6 1047 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 MYCT1Q8N699 235 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 C12orf76Q8N812 135 aaPredicted RBP15.81■□□□□ 0.12
DDX39A-208ENST00000588692 CMASQ8NFW8 434 aaPredicted RBP15.81■□□□□ 0.12
DDX39A-208ENST00000588692 HASPINQ8TF76 798 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 HDAC7Q8WUI4 952 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 RIN2Q8WYP3 895 aaPredicted RBP15.81■□□□□ 0.12
DDX39A-208ENST00000588692 B3GALT6Q96L58 329 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 USP28Q96RU2 1077 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 TTPALQ9BTX7 342 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 POMKQ9H5K3 350 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 CACNG4Q9UBN1 327 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 MUTYHQ9UIF7 546 aa15.81■□□□□ 0.12
DDX39A-208ENST00000588692 C2orf16Q68DN1 1984 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 VWA8A3KMH1 1905 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 K7ENM7 598 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 CLDN3O15551 220 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 TRAK2O60296 914 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 HSP90AA1P07900 732 aaKnown RBP15.8■□□□□ 0.12
DDX39A-208ENST00000588692 NASPP49321 788 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-208ENST00000588692 MCL1Q07820 350 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 RTP2Q5QGT7 225 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 DCLRE1AQ6PJP8 1040 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 CYP26C1Q6V0L0 522 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-208ENST00000588692 USP49Q70CQ1 688 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 GPR149Q86SP6 731 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 KRI1Q8N9T8 703 aaKnown RBP15.8■□□□□ 0.12
DDX39A-208ENST00000588692 PIK3R5Q8WYR1 880 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 BICD1Q96G01 975 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 DDX27Q96GQ7 796 aaKnown RBP15.8■□□□□ 0.12
DDX39A-208ENST00000588692 RHOBTB2Q9BYZ6 727 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 PLEKHA4Q9H4M7 779 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 MAN1C1Q9NR34 630 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 CNTN3Q9P232 1028 aa15.8■□□□□ 0.12
DDX39A-208ENST00000588692 FAM86C2PA6NEL3 165 aa15.79■□□□□ 0.12
DDX39A-208ENST00000588692 HNRNPDLO14979 420 aaKnown RBP15.79■□□□□ 0.12
DDX39A-208ENST00000588692 PIGRP01833 764 aa15.79■□□□□ 0.12
DDX39A-208ENST00000588692 HARSP12081 509 aaKnown RBP15.79■□□□□ 0.12
DDX39A-208ENST00000588692 CLCNKBP51801 687 aa15.79■□□□□ 0.12
DDX39A-208ENST00000588692 KYAT1Q16773 422 aa15.79■□□□□ 0.12
DDX39A-208ENST00000588692 UPP1Q16831 310 aa15.79■□□□□ 0.12
DDX39A-208ENST00000588692 SPECC1Q5M775 1068 aa15.79■□□□□ 0.12
DDX39A-208ENST00000588692 FAM171A1Q5VUB5 890 aa15.79■□□□□ 0.12
DDX39A-208ENST00000588692 TMC5Q6UXY8 1006 aa15.79■□□□□ 0.12
DDX39A-208ENST00000588692 ZBTB45Q96K62 511 aaPredicted RBP15.79■□□□□ 0.12
DDX39A-208ENST00000588692 ZNF396Q96N95 335 aaPredicted RBP15.79■□□□□ 0.12
DDX39A-208ENST00000588692 CLIC6Q96NY7 704 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms