RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 NTHL1P78549 312 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 HTR4Q13639 388 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 PPP2R5AQ15172 486 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 GLRA4Q5JXX5 417 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 RIF1Q5UIP0 2472 aaKnown RBP18.53■□□□□ 0.56
LINC01842-201ENST00000588275 HAUS3Q68CZ6 603 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 LNX1Q8TBB1 728 aaPredicted RBP18.53■□□□□ 0.56
LINC01842-201ENST00000588275 PIK3R5Q8WYR1 880 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 SNX27Q96L92 541 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 IFT74Q96LB3 600 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 CLSTN3Q9BQT9 956 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 CCDC113Q9H0I3 377 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 ARHGEF3Q9NR81 526 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 VWA8A3KMH1 1905 aa18.53■□□□□ 0.56
LINC01842-201ENST00000588275 FAM186AA6NE01 2351 aa18.52■□□□□ 0.56
LINC01842-201ENST00000588275 ACKR2O00590 384 aa18.52■□□□□ 0.56
LINC01842-201ENST00000588275 CCT6AP40227 531 aaKnown RBP18.52■□□□□ 0.56
LINC01842-201ENST00000588275 ELAVL2Q12926 359 aaKnown RBP18.52■□□□□ 0.56
LINC01842-201ENST00000588275 DCAF4L1Q3SXM0 396 aa18.52■□□□□ 0.56
LINC01842-201ENST00000588275 TTC38Q5R3I4 469 aa18.52■□□□□ 0.56
LINC01842-201ENST00000588275 ADSSL1Q8N142 457 aa18.52■□□□□ 0.56
LINC01842-201ENST00000588275 MYH15Q9Y2K3 1946 aa18.51■□□□□ 0.55
LINC01842-201ENST00000588275 ADAM12O43184 909 aa18.51■□□□□ 0.55
LINC01842-201ENST00000588275 PAPLNO95428 1278 aa18.51■□□□□ 0.55
LINC01842-201ENST00000588275 DCNP07585 359 aaKnown RBP18.51■□□□□ 0.55
LINC01842-201ENST00000588275 SLC7A14Q8TBB6 771 aa18.51■□□□□ 0.55
LINC01842-201ENST00000588275 KCNG4Q8TDN1 519 aa18.51■□□□□ 0.55
LINC01842-201ENST00000588275 BHMT2Q9H2M3 363 aa18.51■□□□□ 0.55
LINC01842-201ENST00000588275 ANHXE9PGG2 379 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 XYLBO75191 536 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 HNRNPA1P09651 372 aaKnown RBP eCLIP18.5■□□□□ 0.55
LINC01842-201ENST00000588275 OR1D2P34982 312 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 ORC2Q13416 577 aaPredicted RBP18.5■□□□□ 0.55
LINC01842-201ENST00000588275 NBR1Q14596 966 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 NAB2Q15742 525 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 ATF7IP2Q5U623 682 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 PDXDC1Q6P996 788 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 DCLRE1AQ6PJP8 1040 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 PARM1Q6UWI2 310 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.5■□□□□ 0.55
LINC01842-201ENST00000588275 FGF14Q92915 247 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 RPP25Q9BUL9 199 aaKnown RBP18.5■□□□□ 0.55
LINC01842-201ENST00000588275 CDH7Q9ULB5 785 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 TRIP11Q15643 1979 aa18.5■□□□□ 0.55
LINC01842-201ENST00000588275 SPTBN4Q9H254 2564 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 B3GAT3O94766 335 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 CLCNKBP51801 687 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 EFNA5P52803 228 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 ECM1Q16610 540 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 AXDND1Q5T1B0 1012 aaPredicted RBP18.49■□□□□ 0.55
LINC01842-201ENST00000588275 NT5DC1Q5TFE4 455 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 FAM184AQ8NB25 1140 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 FOXQ1Q9C009 403 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 FOXP1Q9H334 677 aaPredicted RBP18.49■□□□□ 0.55
LINC01842-201ENST00000588275 GOLGA2P5Q9HBQ8 144 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 PPP4R2Q9NY27 417 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 LRWD1Q9UFC0 647 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 NOL7Q9UMY1 257 aaKnown RBP18.49■□□□□ 0.55
LINC01842-201ENST00000588275 LIMCH1Q9UPQ0 1083 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 KIAA1024Q9UPX6 916 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 SIT1Q9Y3P8 196 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 CDY1Q9Y6F8 540 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 ZFP37Q9Y6Q3 630 aaPredicted RBP18.49■□□□□ 0.55
LINC01842-201ENST00000588275 R4GN57 208 aa18.49■□□□□ 0.55
LINC01842-201ENST00000588275 CCDC169A6NNP5 214 aa18.48■□□□□ 0.55
LINC01842-201ENST00000588275 I3L4J1 428 aa18.48■□□□□ 0.55
LINC01842-201ENST00000588275 IGFBP6P24592 240 aaPredicted RBP18.48■□□□□ 0.55
LINC01842-201ENST00000588275 OSTNP61366 133 aa18.48■□□□□ 0.55
LINC01842-201ENST00000588275 APBB1IPQ7Z5R6 666 aaPredicted RBP18.48■□□□□ 0.55
LINC01842-201ENST00000588275 ITFG1Q8TB96 612 aa18.48■□□□□ 0.55
LINC01842-201ENST00000588275 SNX29Q8TEQ0 813 aa18.48■□□□□ 0.55
LINC01842-201ENST00000588275 KIFAP3Q92845 792 aa18.48■□□□□ 0.55
LINC01842-201ENST00000588275 FGF13Q92913 245 aa18.48■□□□□ 0.55
LINC01842-201ENST00000588275 SLC2A4RGQ9NR83 387 aa18.48■□□□□ 0.55
LINC01842-201ENST00000588275 DDX19AQ9NUU7 478 aaKnown RBP18.48■□□□□ 0.55
LINC01842-201ENST00000588275 HCFC1R1Q9NWW0 138 aa18.48■□□□□ 0.55
LINC01842-201ENST00000588275 K7ERI5 159 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 EIF5BO60841 1220 aaKnown RBP18.47■□□□□ 0.55
LINC01842-201ENST00000588275 SEC24BO95487 1268 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 MUTP22033 750 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 TKTP29401 623 aaKnown RBP18.47■□□□□ 0.55
LINC01842-201ENST00000588275 HOXA9P31269 272 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 BRCC3P46736 316 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 RBM25P49756 843 aaKnown RBP18.47■□□□□ 0.55
LINC01842-201ENST00000588275 YARSP54577 528 aaKnown RBP18.47■□□□□ 0.55
LINC01842-201ENST00000588275 GPC5P78333 572 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 ZNF568Q3ZCX4 644 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 PHLDB3Q6NSJ2 640 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 MTSS1LQ765P7 747 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 CEP120Q8N960 986 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 ING5Q8WYH8 240 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 PPP1R10Q96QC0 940 aaKnown RBP18.47■□□□□ 0.55
LINC01842-201ENST00000588275 KXD1Q9BQD3 176 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 MTRRQ9UBK8 725 aa18.47■□□□□ 0.55
LINC01842-201ENST00000588275 FGFR3P22607 806 aa18.46■□□□□ 0.55
LINC01842-201ENST00000588275 FXR2P51116 673 aaKnown RBP eCLIP18.46■□□□□ 0.55
LINC01842-201ENST00000588275 PEX3P56589 373 aa18.46■□□□□ 0.55
LINC01842-201ENST00000588275 SNW1Q13573 536 aaKnown RBP18.46■□□□□ 0.55
LINC01842-201ENST00000588275 RAB33AQ14088 237 aa18.46■□□□□ 0.55
LINC01842-201ENST00000588275 PABPC1LQ4VXU2 614 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms