RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 C8AP07357 584 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 RFX1P22670 979 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 HOXA9P31269 272 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 CREMQ03060 361 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 CALCRLQ16602 461 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 FAM187BQ17R55 369 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 NPAS3Q8IXF0 933 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 HACE1Q8IYU2 909 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 CCDC113Q9H0I3 377 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 DLL3Q9NYJ7 618 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 DNMT3BQ9UBC3 853 aaKnown RBP13.16□□□□□ -0.3
BRCA1-225ENST00000586385 MTCL1Q9Y4B5 1905 aaKnown RBP13.15□□□□□ -0.3
BRCA1-225ENST00000586385 FRYLO94915 3013 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 KANSL1LA0AUZ9 987 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 BTBD18B2RXH4 712 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 NRG2O14511 850 aaPredicted RBP13.15□□□□□ -0.3
BRCA1-225ENST00000586385 MED24O75448 989 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 POU2F2P09086 479 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 CD72P21854 359 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 FGFR3P22607 806 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 KRT2P35908 639 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 TXKP42681 527 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 RAB33AQ14088 237 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 MLF2Q15773 248 aaPredicted RBP13.15□□□□□ -0.3
BRCA1-225ENST00000586385 SLC44A4Q53GD3 710 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 PPM1LQ5SGD2 360 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 CEP57Q86XR8 500 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 NOSTRINQ8IVI9 506 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 NECAB1Q8N987 351 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 SLC7A14Q8TBB6 771 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 RUBCNQ92622 972 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 PRIMPOLQ96LW4 560 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 KXD1Q9BQD3 176 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 PRMT7Q9NVM4 692 aaPredicted RBP13.15□□□□□ -0.3
BRCA1-225ENST00000586385 TDRD15B5MCY1 1934 aaKnown RBP13.15□□□□□ -0.3
BRCA1-225ENST00000586385 FANCMQ8IYD8 2048 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
BRCA1-225ENST00000586385 DNAH14Q0VDD8 3507 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 XRCC6P12956 609 aaKnown RBP eCLIP13.14□□□□□ -0.31
BRCA1-225ENST00000586385 XBP1P17861 261 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 FZD5Q13467 585 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 SLC5A9Q2M3M2 681 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 AXDND1Q5T1B0 1012 aaPredicted RBP13.14□□□□□ -0.31
BRCA1-225ENST00000586385 LIN9Q5TKA1 542 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 DGLUCYQ7Z3D6 616 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 CATSPER3Q86XQ3 398 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 C3orf58Q8NDZ4 430 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 PLA2G2FQ9BZM2 168 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 LTB4R2Q9NPC1 389 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 MTRRQ9UBK8 725 aa13.14□□□□□ -0.31
BRCA1-225ENST00000586385 VWA8A3KMH1 1905 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 TMEM189-UBE2V1I3L0A0 370 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 N4BP3O15049 544 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 NEMFO60524 1076 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 JAK2O60674 1132 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 THP07101 528 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 TARSP26639 723 aaKnown RBP13.13□□□□□ -0.31
BRCA1-225ENST00000586385 OR1D2P34982 312 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 PRKCQQ04759 706 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 ST3GAL1Q11201 340 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 ME3Q16798 604 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 GLRA4Q5JXX5 417 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 NT5DC1Q5TFE4 455 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 ZC3H14Q6PJT7 736 aaKnown RBP13.13□□□□□ -0.31
BRCA1-225ENST00000586385 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.13□□□□□ -0.31
BRCA1-225ENST00000586385 DIS3L2Q8IYB7 885 aaKnown RBP13.13□□□□□ -0.31
BRCA1-225ENST00000586385 NSUN7Q8NE18 718 aaKnown RBP13.13□□□□□ -0.31
BRCA1-225ENST00000586385 ING5Q8WYH8 240 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 NELL1Q92832 810 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 CLDN23Q96B33 292 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 SHDQ96IW2 340 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 PPP1R10Q96QC0 940 aaKnown RBP13.13□□□□□ -0.31
BRCA1-225ENST00000586385 KIFC3Q9BVG8 833 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 POLD4Q9HCU8 107 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 POLIQ9UNA4 740 aa13.13□□□□□ -0.31
BRCA1-225ENST00000586385 MYH15Q9Y2K3 1946 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 FAM170BA6NMN3 283 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 I3L4J1 428 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 ACKR2O00590 384 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 XYLBO75191 536 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 PRKCBP05771 671 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 TKTP29401 623 aaKnown RBP13.12□□□□□ -0.31
BRCA1-225ENST00000586385 FOSBP53539 338 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 SOX4Q06945 474 aaPredicted RBP13.12□□□□□ -0.31
BRCA1-225ENST00000586385 PRPF4BQ13523 1007 aaKnown RBP13.12□□□□□ -0.31
BRCA1-225ENST00000586385 PUM1Q14671 1186 aaKnown RBP eCLIP13.12□□□□□ -0.31
BRCA1-225ENST00000586385 UBXN2BQ14CS0 331 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 ZNF528Q3MIS6 628 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 PABPC1LQ4VXU2 614 aaKnown RBP13.12□□□□□ -0.31
BRCA1-225ENST00000586385 MTSS1LQ765P7 747 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 ZNF687Q8N1G0 1237 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 ZBTB44Q8NCP5 570 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 MCPH1Q8NEM0 835 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
BRCA1-225ENST00000586385 OSBPL6Q9BZF3 934 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 GOLGA2P5Q9HBQ8 144 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 TUFT1Q9NNX1 390 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 SPATA6Q9NWH7 488 aaPredicted RBP13.12□□□□□ -0.31
BRCA1-225ENST00000586385 FBXO4Q9UKT5 387 aa13.12□□□□□ -0.31
BRCA1-225ENST00000586385 KCNH3Q9ULD8 1083 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms