RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 TMEM265A0A087WTH1 108 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 GTPBP10A4D1E9 387 aaKnown RBP13.75□□□□□ -0.21
VMP1-202ENST00000585847 TGFB1I1O43294 461 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 N4BP1O75113 896 aaKnown RBP13.75□□□□□ -0.21
VMP1-202ENST00000585847 BAIAP3O94812 1187 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 ERLIN2O94905 339 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 MCCD1P59942 119 aaPredicted RBP13.75□□□□□ -0.21
VMP1-202ENST00000585847 IKBKEQ14164 716 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 KYAT1Q16773 422 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 ATF7IP2Q5U623 682 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 APBB1IPQ7Z5R6 666 aaPredicted RBP13.75□□□□□ -0.21
VMP1-202ENST00000585847 ZNF598Q86UK7 904 aaKnown RBP13.75□□□□□ -0.21
VMP1-202ENST00000585847 IRF2BP1Q8IU81 584 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 CNGA4Q8IV77 575 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 TRIM59Q8IWR1 403 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 NELFCDQ8IXH7 590 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 SMG8Q8ND04 991 aaKnown RBP13.75□□□□□ -0.21
VMP1-202ENST00000585847 ERGIC2Q96RQ1 377 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 FTHL17Q9BXU8 183 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 MRPL4Q9BYD3 311 aaKnown RBP13.75□□□□□ -0.21
VMP1-202ENST00000585847 DMAC2Q9NW81 257 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 STYXL1Q9Y6J8 313 aa13.75□□□□□ -0.21
VMP1-202ENST00000585847 ANK1P16157 1881 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 MEIS3P2A8K0S8 358 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 HNRNPDLO14979 420 aaKnown RBP13.74□□□□□ -0.21
VMP1-202ENST00000585847 PMM2O15305 246 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 P4HA2O15460 535 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 MEFVO15553 781 aaPredicted RBP13.74□□□□□ -0.21
VMP1-202ENST00000585847 AP5Z1O43299 807 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 FAM189A1O60320 539 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 LDHAP00338 332 aaKnown RBP13.74□□□□□ -0.21
VMP1-202ENST00000585847 ADSSP30520 456 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 VWA3BQ502W6 1294 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 NOTUMQ6P988 496 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 TMCO2Q7Z6W1 182 aaPredicted RBP13.74□□□□□ -0.21
VMP1-202ENST00000585847 MRPL10Q7Z7H8 261 aaKnown RBP13.74□□□□□ -0.21
VMP1-202ENST00000585847 ECHDC2Q86YB7 292 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 CEP120Q8N960 986 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 ZSWIM2Q8NEG5 633 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 NUCKS1Q9H1E3 243 aaKnown RBP13.74□□□□□ -0.21
VMP1-202ENST00000585847 CDT1Q9H211 546 aa13.74□□□□□ -0.21
VMP1-202ENST00000585847 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.74□□□□□ -0.21
VMP1-202ENST00000585847 A0A0U1RQF3 1178 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 ZNF623O75123 536 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 NPTXRO95502 500 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 ACTN1P12814 892 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 KRT13P13646 458 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 ZSCAN20P17040 1043 aaPredicted RBP13.73□□□□□ -0.21
VMP1-202ENST00000585847 RFX1P22670 979 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 PBX1P40424 430 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 KCNJ6P48051 423 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 MCL1Q07820 350 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 CETN1Q12798 172 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 ARMCX5Q6P1M9 558 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 SLC27A1Q6PCB7 646 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 SLC24A5Q71RS6 500 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 PPFIBP1Q86W92 1011 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 TMEM192Q8IY95 271 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 XXYLT1Q8NBI6 393 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 NAA15Q9BXJ9 866 aaKnown RBP13.73□□□□□ -0.21
VMP1-202ENST00000585847 CXCL16Q9H2A7 254 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 NDST4Q9H3R1 872 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 C1orf112Q9NSG2 853 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 FAM105AQ9NUU6 356 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 HES2Q9Y543 173 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 PDCD11Q14690 1871 aaKnown RBP13.73□□□□□ -0.21
VMP1-202ENST00000585847 VCANP13611 3396 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 CITO14578 2027 aa13.73□□□□□ -0.21
VMP1-202ENST00000585847 A0A0B4J269 797 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 A0A1W2PQJ5 194 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 EXOC3O60645 756 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 TOM1L1O75674 476 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 GTF2H1P32780 548 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 UBXN1Q04323 297 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 ZBTB41Q5SVQ8 909 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 TWF2Q6IBS0 349 aaKnown RBP13.72□□□□□ -0.21
VMP1-202ENST00000585847 MPZL3Q6UWV2 235 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 AGMOQ6ZNB7 445 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 FAM186BQ8IYM0 893 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 LPPQ93052 612 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 TOP1MTQ969P6 601 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 FBXL18Q96ME1 805 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 CBWD1Q9BRT8 395 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 NXF3Q9H4D5 531 aaKnown RBP13.72□□□□□ -0.21
VMP1-202ENST00000585847 RC3H2Q9HBD1 1191 aaKnown RBP13.72□□□□□ -0.21
VMP1-202ENST00000585847 IPPQ9Y573 584 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 PCDHB2Q9Y5E7 798 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 RALGAPA2Q2PPJ7 1873 aa13.72□□□□□ -0.21
VMP1-202ENST00000585847 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.71□□□□□ -0.21
VMP1-202ENST00000585847 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.71□□□□□ -0.21
VMP1-202ENST00000585847 GRXCR1A8MXD5 290 aa13.71□□□□□ -0.21
VMP1-202ENST00000585847 EFCAB14O75071 495 aa13.71□□□□□ -0.21
VMP1-202ENST00000585847 AFPP02771 609 aaKnown RBP13.71□□□□□ -0.21
VMP1-202ENST00000585847 DNAJB2P25686 324 aa13.71□□□□□ -0.21
VMP1-202ENST00000585847 LIG4P49917 911 aa13.71□□□□□ -0.21
VMP1-202ENST00000585847 GATMP50440 423 aa13.71□□□□□ -0.21
VMP1-202ENST00000585847 NCBP1Q09161 790 aaKnown RBP13.71□□□□□ -0.21
VMP1-202ENST00000585847 ZNF568Q3ZCX4 644 aa13.71□□□□□ -0.21
VMP1-202ENST00000585847 SEZ6Q53EL9 994 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms