RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 THP07101 528 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 C8AP07357 584 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 POU2F2P09086 479 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 FDPSP14324 419 aaKnown RBP11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 RPL17P18621 184 aaKnown RBP11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 PDCP20941 246 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 KRT2P35908 639 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 RARRES1P49788 294 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 GPC5P78333 572 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 PSMD5Q16401 504 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 ZNF528Q3MIS6 628 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 PRSS55Q6UWB4 352 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 PPP4R3CPQ6ZMV5 832 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 APBB1IPQ7Z5R6 666 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 GRASPQ7Z6J2 395 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 GSTCDQ8NEC7 633 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 MCPH1Q8NEM0 835 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 RMDN1Q96DB5 314 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 NELL2Q99435 816 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 C2orf40Q9H1Z8 148 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 TTC12Q9H892 705 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 DLGAP2Q9P1A6 1054 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 FBXO4Q9UKT5 387 aa11.85□□□□□ -0.51
CSNK1D-226ENST00000585026 SPTLC1O15269 473 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 B4GALT5O43286 388 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 USO1O60763 962 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 GJB2P29033 226 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 SNW1Q13573 536 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 UBXN2BQ14CS0 331 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 MLF2Q15773 248 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 SLC44A4Q53GD3 710 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 RTP2Q5QGT7 225 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 PARM1Q6UWI2 310 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 NSUN7Q8NE18 718 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 LNX1Q8TBB1 728 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 OXER1Q8TDS5 423 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 ATRIPQ8WXE1 791 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 FGF13Q92913 245 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 FGF14Q92915 247 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 CLSTN3Q9BQT9 956 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 SPATA6Q9NWH7 488 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 ORC3Q9UBD5 711 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 KCNH3Q9ULD8 1083 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 MRPS17Q9Y2R5 130 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 ZDHHC9Q9Y397 364 aa11.84□□□□□ -0.51
CSNK1D-226ENST00000585026 CASTOR2A6NHX0 329 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 CCL16O15467 120 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 TRAPPC3O43617 180 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 ATP2B1P20020 1258 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 SYT1P21579 422 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 TXKP42681 527 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 PRPF4BQ13523 1007 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 RAB33AQ14088 237 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 TRIM29Q14134 588 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 MAPK6Q16659 721 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 FAM187BQ17R55 369 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 AXDND1Q5T1B0 1012 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 CDR2LQ86X02 465 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 PIGOQ8TEQ8 1089 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 RABGGTAQ92696 567 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 NACC1Q96RE7 527 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 FOXQ1Q9C009 403 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 FZD8Q9H461 694 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 TUFT1Q9NNX1 390 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 NCDNQ9UBB6 729 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 KIF3AQ9Y496 699 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 PCDHGA2Q9Y5H1 932 aa11.83□□□□□ -0.52
CSNK1D-226ENST00000585026 FAM170BA6NMN3 283 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 STX6O43752 255 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 NEMFO60524 1076 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 KIF4AO95239 1232 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 OR1D2P34982 312 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 PPP2R5AQ15172 486 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 PABPC1LQ4VXU2 614 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 ZBTB41Q5SVQ8 909 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 CDCA2Q69YH5 1023 aaPredicted RBP11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 ANKS3Q6ZW76 656 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 MAEAQ7L5Y9 396 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 DEPTORQ8TB45 409 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 SLC7A14Q8TBB6 771 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 HASPINQ8TF76 798 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 UROC1Q96N76 676 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 RPP25Q9BUL9 199 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 DDX23Q9BUQ8 820 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 SNTG2Q9NY99 539 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 GDE1Q9NZC3 331 aa11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 MRPS23Q9Y3D9 190 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-226ENST00000585026 C2orf16Q68DN1 1984 aa11.81□□□□□ -0.52
CSNK1D-226ENST00000585026 TMEM189-UBE2V1I3L0A0 370 aa11.81□□□□□ -0.52
CSNK1D-226ENST00000585026 ACKR2O00590 384 aa11.81□□□□□ -0.52
CSNK1D-226ENST00000585026 JAK2O60674 1132 aa11.81□□□□□ -0.52
CSNK1D-226ENST00000585026 RECQL4O94761 1208 aa11.81□□□□□ -0.52
CSNK1D-226ENST00000585026 B3GAT3O94766 335 aa11.81□□□□□ -0.52
CSNK1D-226ENST00000585026 PRKCBP05771 671 aa11.81□□□□□ -0.52
CSNK1D-226ENST00000585026 ELF1P32519 619 aa11.81□□□□□ -0.52
CSNK1D-226ENST00000585026 NAMPTP43490 491 aa11.81□□□□□ -0.52
CSNK1D-226ENST00000585026 NTHL1P78549 312 aa11.81□□□□□ -0.52
CSNK1D-226ENST00000585026 CSTF1Q05048 431 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms