RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TMEM240Q5SV17 173 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 PDE4DIPQ5VU43 2346 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 CDKAL1Q5VV42 579 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 C16orf59Q7L2K0 433 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 NPAS4Q8IUM7 802 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 TMEM192Q8IY95 271 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 FNBP1Q96RU3 617 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 RPS6KC1Q96S38 1066 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 RSAD1Q9HA92 442 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 HOXA2O43364 376 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 TPM2P07951 284 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 ATF7P17544 494 aaPredicted RBP19.88■□□□□ 0.77
RFFL-211ENST00000584541 VAMP7P51809 220 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 MARSP56192 900 aaKnown RBP19.88■□□□□ 0.77
RFFL-211ENST00000584541 ENPEPQ07075 957 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 BFSP1Q12934 665 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 PSMD6Q15008 389 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.88■□□□□ 0.77
RFFL-211ENST00000584541 ZNF598Q86UK7 904 aaKnown RBP19.88■□□□□ 0.77
RFFL-211ENST00000584541 GAS2L3Q86XJ1 694 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 TMC2Q8TDI7 906 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 LPPQ93052 612 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 SNX27Q96L92 541 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.88■□□□□ 0.772e-7■■■□□ 18.7
RFFL-211ENST00000584541 RNF39Q9H2S5 420 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 ASB7Q9H672 318 aa19.88■□□□□ 0.77
RFFL-211ENST00000584541 MKI67P46013 3256 aaKnown RBP19.88■□□□□ 0.77
RFFL-211ENST00000584541 MAGEA10P43363 369 aaPredicted RBP19.87■□□□□ 0.77
RFFL-211ENST00000584541 EPHB4P54760 987 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 WDR5P61964 334 aaKnown RBP19.87■□□□□ 0.77
RFFL-211ENST00000584541 SLC10A6Q3KNW5 377 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 TCP11X2Q5H9J9 407 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 DCAF17Q5H9S7 520 aaPredicted RBP19.87■□□□□ 0.77
RFFL-211ENST00000584541 TCERG1LQ5VWI1 586 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 GLB1LQ6UWU2 654 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 AGMOQ6ZNB7 445 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 IRF2BP1Q8IU81 584 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 ABI1Q8IZP0 508 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 HERVK_113Q902F9 699 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 CCDC127Q96BQ5 260 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 TSPAN18Q96SJ8 248 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 RBSNQ9H1K0 784 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 KLK14Q9P0G3 267 aa19.87■□□□□ 0.77
RFFL-211ENST00000584541 TTC26A0AVF1 554 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 LACTBL1A8MY62 500 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 STX10O60499 249 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 DLATP10515 647 aaKnown RBP19.86■□□□□ 0.77
RFFL-211ENST00000584541 ZNF18P17022 549 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 NT5DC4Q86YG4 428 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 URGCPQ8TCY9 931 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 PARD3BQ8TEW8 1205 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 RSPH1Q8WYR4 309 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 BORCS6Q96GS4 357 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 PDE11AQ9HCR9 933 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.86■□□□□ 0.77
RFFL-211ENST00000584541 PTPRSQ13332 1948 aa19.86■□□□□ 0.77
RFFL-211ENST00000584541 MEIS3P2A8K0S8 358 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 XPOTO43592 962 aaKnown RBP19.85■□□□□ 0.77
RFFL-211ENST00000584541 UPP2O95045 317 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 PRKCSHP14314 528 aaPredicted RBP19.85■□□□□ 0.77
RFFL-211ENST00000584541 TNNI1P19237 187 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 MLH1P40692 756 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 TRIM59Q8IWR1 403 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 CACTINQ8WUQ7 758 aaKnown RBP19.85■□□□□ 0.77
RFFL-211ENST00000584541 GAD1Q99259 594 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 CGRRF1Q99675 332 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 TUBGCP2Q9BSJ2 902 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 HSD3B7Q9H2F3 369 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 CNTN3Q9P232 1028 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 DERAQ9Y315 318 aa19.85■□□□□ 0.77
RFFL-211ENST00000584541 FNDC1Q4ZHG4 1894 aaPredicted RBP19.85■□□□□ 0.77
RFFL-211ENST00000584541 ARL5CA6NH57 179 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 AP3M2P53677 418 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 DEFB103AP81534 67 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 TMEM132DQ14C87 1099 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 MAN2A1Q16706 1144 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 XKR4Q5GH76 650 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 ALKAL1Q6UXT8 129 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 WDR49Q8IV35 697 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 HELQQ8TDG4 1101 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 TOP1MTQ969P6 601 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 KIF12Q96FN5 646 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 KANSL3Q9P2N6 904 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 LIMA1Q9UHB6 759 aaKnown RBP19.84■□□□□ 0.77
RFFL-211ENST00000584541 INPP5FQ9Y2H2 1132 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 C2CD2Q9Y426 696 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.84■□□□□ 0.77
RFFL-211ENST00000584541 SLC4A7Q9Y6M7 1214 aa19.84■□□□□ 0.77
RFFL-211ENST00000584541 LRRIQ3A6PVS8 624 aaPredicted RBP19.83■□□□□ 0.77
RFFL-211ENST00000584541 H0YGN5 161 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 OFD1O75665 1012 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 SERPINC1P01008 464 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 TNNC2P02585 160 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 TMEM191BP0C7N4 346 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 TRIM49P0CI25 452 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 TRIM49CP0CI26 452 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 FGFR1P11362 822 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 KCNE1P15382 129 aa19.83■□□□□ 0.77
RFFL-211ENST00000584541 TFAMQ00059 246 aaKnown RBP19.83■□□□□ 0.77
RFFL-211ENST00000584541 KRT31Q15323 416 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms