RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 ITIH6Q6UXX5 1313 aa18.14■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TTC26A0AVF1 554 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TEX33O43247 280 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ZNF623O75123 536 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TIMP1P01033 207 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 DLATP10515 647 aaKnown RBP18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 MXI1P50539 228 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 YARSP54577 528 aaKnown RBP18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 WNT7BP56706 349 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 OSTNP61366 133 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 DLG4P78352 724 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 MYL7Q01449 175 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 NT5DC4Q86YG4 428 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 LINC01599Q8WXQ3 324 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SCLYQ96I15 445 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ADAM2Q99965 735 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TSPYL2Q9H2G4 693 aaPredicted RBP18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PLEKHA5Q9HAU0 1116 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TMEM8AQ9HCN3 771 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PDE11AQ9HCR9 933 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PRDM5Q9NQX1 630 aaPredicted RBP18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 RGS18Q9NS28 235 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SNTG2Q9NY99 539 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TET1Q8NFU7 2136 aa18.13■□□□□ 0.49
CDK5RAP3-230ENST00000584042 A0A0U1RQF3 1178 aa18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TRIM43BA6NCK2 446 aa18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CCL23P55773 120 aa18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PPP3CAQ08209 521 aa18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 COL13A1Q5TAT6 717 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 VSTM4Q8IW00 320 aa18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TRIM43Q96BQ3 446 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PDLIM2Q96JY6 352 aa18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TSPAN18Q96SJ8 248 aa18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CNTN3Q9P232 1028 aa18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 DERAQ9Y315 318 aa18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 C2CD2Q9Y426 696 aa18.12■□□□□ 0.49
CDK5RAP3-230ENST00000584042 MEFVO15553 781 aaPredicted RBP18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PFKMP08237 780 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TNNI1P19237 187 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SLC10A6Q3KNW5 377 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CBWD6Q4V339 395 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 XKR4Q5GH76 650 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CBWD3Q5JTY5 395 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CBWD5Q5RIA9 395 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 KRT39Q6A163 491 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 C15orf39Q6ZRI6 1047 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 MRPL10Q7Z7H8 261 aaKnown RBP18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 EFCAB13Q8IY85 973 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 DBF4BQ8NFT6 615 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 HTATIP2Q9BUP3 242 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TMEM117Q9H0C3 514 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 GCNT4Q9P109 453 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 HES2Q9Y543 173 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PTPRJQ12913 1337 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TRIP11Q15643 1979 aa18.11■□□□□ 0.49
CDK5RAP3-230ENST00000584042 LACTBL1A8MY62 500 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 C9IYK1 514 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 RAG1P15918 1043 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ATF7P17544 494 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 GCLMP48507 274 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CCDC173Q0VFZ6 552 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CETN1Q12798 172 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SYCP1Q15431 976 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ZACNQ401N2 412 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 MFSD5Q6N075 450 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 CNKSR3Q6P9H4 555 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 GBP6Q6ZN66 633 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SLC24A5Q71RS6 500 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ECHDC2Q86YB7 292 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PGBD4Q96DM1 585 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 APOL6Q9BWW8 343 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 MMRN2Q9H8L6 949 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SIK3Q9Y2K2 1263 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 GIT1Q9Y2X7 761 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 COQ4Q9Y3A0 265 aa18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.1■□□□□ 0.49
CDK5RAP3-230ENST00000584042 NFICP08651 508 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TMEM191BP0C7N4 346 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ITGA4P13612 1032 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 KCNE1P15382 129 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TRIM14Q14142 442 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TMEM132DQ14C87 1099 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 EXOC3L4Q17RC7 722 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 EPC2Q52LR7 807 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SPECC1LQ69YQ0 1117 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 JADE1Q6IE81 842 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ALKAL1Q6UXT8 129 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 SV2AQ7L0J3 742 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ZNF598Q86UK7 904 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 TMEM199Q8N511 208 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 IQCDQ96DY2 449 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 FAM212AQ96EL1 285 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ANKRD36BP1Q96IX9 119 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 POP1Q99575 1024 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 ELAC1Q9H777 363 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 UBN1Q9NPG3 1134 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 PRKAG2Q9UGJ0 569 aa18.09■□□□□ 0.49
CDK5RAP3-230ENST00000584042 INPPL1O15357 1258 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 EOMESO95936 686 aa18.08■□□□□ 0.48
CDK5RAP3-230ENST00000584042 TNNC2P02585 160 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms