RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ADAM12O43184 909 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 NR1I2O75469 434 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 F13A1P00488 732 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 IGFBP6P24592 240 aaPredicted RBP17.26■□□□□ 0.35
SKA2-209ENST00000583976 NTHL1P78549 312 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 TUSC3Q13454 348 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 USP41Q3LFD5 358 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 STAMQ92783 540 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 RHOBTB2Q9BYZ6 727 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 CCDC113Q9H0I3 377 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 NT5C3AQ9H0P0 336 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 PIDD1Q9HB75 910 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 SNTG2Q9NY99 539 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 FBXW11Q9UKB1 542 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 CLIC4Q9Y696 253 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 DMXL1Q9Y485 3027 aa17.26■□□□□ 0.35
SKA2-209ENST00000583976 PTPRZ1P23471 2315 aaPredicted RBP17.26■□□□□ 0.35
SKA2-209ENST00000583976 PAPLNO95428 1278 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 PRKCBP05771 671 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 HTR4Q13639 388 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 ANGPT1Q15389 498 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 SF3A1Q15459 793 aaKnown RBP17.25■□□□□ 0.35
SKA2-209ENST00000583976 NAB2Q15742 525 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 TMEM132AQ24JP5 1023 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 GLRA4Q5JXX5 417 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 LILRA6Q6PI73 481 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 ELMSAN1Q6PJG2 1045 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 ZBTB8OSQ8IWT0 167 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 MCPH1Q8NEM0 835 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 GPR152Q8TDT2 470 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 SNX27Q96L92 541 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 FZD8Q9H461 694 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 TBC1D17Q9HA65 648 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 POLD4Q9HCU8 107 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.25■□□□□ 0.35
SKA2-209ENST00000583976 PRMT7Q9NVM4 692 aaPredicted RBP17.25■□□□□ 0.35
SKA2-209ENST00000583976 ZDHHC7Q9NXF8 308 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 FNIP2Q9P278 1114 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 NUMBLQ9Y6R0 609 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 WDR87Q6ZQQ6 2873 aa17.25■□□□□ 0.35
SKA2-209ENST00000583976 TADA2AO75478 443 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 ZMYND10O75800 440 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 PSMD5Q16401 504 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 FAM171A1Q5VUB5 890 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 PADI6Q6TGC4 694 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 SLC44A3Q8N4M1 653 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 DTWD2Q8NBA8 298 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 PRIMPOLQ96LW4 560 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 PRKD2Q9BZL6 878 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 PLEKHA4Q9H4M7 779 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 TUFT1Q9NNX1 390 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 TFIP11Q9UBB9 837 aaKnown RBP17.24■□□□□ 0.35
SKA2-209ENST00000583976 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
SKA2-209ENST00000583976 FRYLO94915 3013 aa17.24■□□□□ 0.35
SKA2-209ENST00000583976 TRIP11Q15643 1979 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 ARHGEF35A5YM69 484 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 LAD1O00515 517 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 N4BP3O15049 544 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 SRFP11831 508 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 ATP2C1P98194 919 aaPredicted RBP17.23■□□□□ 0.35
SKA2-209ENST00000583976 PRPF4BQ13523 1007 aaKnown RBP17.23■□□□□ 0.35
SKA2-209ENST00000583976 IL17AQ16552 155 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 ECM1Q16610 540 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 FAM187BQ17R55 369 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 CYP26C1Q6V0L0 522 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 DTHD1Q6ZMT9 781 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 GRASPQ7Z6J2 395 aaPredicted RBP17.23■□□□□ 0.35
SKA2-209ENST00000583976 CEP57Q86XR8 500 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 NKD2Q969F2 451 aaPredicted RBP17.23■□□□□ 0.35
SKA2-209ENST00000583976 USP28Q96RU2 1077 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 CLSTN3Q9BQT9 956 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 RPP25Q9BUL9 199 aaKnown RBP17.23■□□□□ 0.35
SKA2-209ENST00000583976 DPP7Q9UHL4 492 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 GDAQ9Y2T3 454 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 ZDHHC9Q9Y397 364 aa17.23■□□□□ 0.35
SKA2-209ENST00000583976 NOTCH4Q99466 2003 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 CCL16O15467 120 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 C8AP07357 584 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 LAMP2P13473 410 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 RFX1P22670 979 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 CREMQ03060 361 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 MAPK6Q16659 721 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 SPECC1Q5M775 1068 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 LNX1Q8TBB1 728 aaPredicted RBP17.22■□□□□ 0.35
SKA2-209ENST00000583976 HDAC7Q8WUI4 952 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 PIK3R5Q8WYR1 880 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 FGF14Q92915 247 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 RTP3Q9BQQ7 232 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 TTPALQ9BTX7 342 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 FOXQ1Q9C009 403 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 C2orf40Q9H1Z8 148 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 GOLGA2P5Q9HBQ8 144 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 ARHGEF3Q9NR81 526 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 WNT16Q9UBV4 365 aa17.22■□□□□ 0.35
SKA2-209ENST00000583976 DNAH14Q0VDD8 3507 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 VWA3AA6NCI4 1184 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 ANHXE9PGG2 379 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 I3L4J1 428 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 STK25O00506 426 aa17.21■□□□□ 0.35
SKA2-209ENST00000583976 DCNP07585 359 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms