RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 NAB2Q15742 525 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 ECM1Q16610 540 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 SPECC1Q5M775 1068 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 PPM1LQ5SGD2 360 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 HAUS3Q68CZ6 603 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 GPR65Q8IYL9 337 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 LNX1Q8TBB1 728 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-222ENST00000583732 PIK3R5Q8WYR1 880 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 NKD2Q969F2 451 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-222ENST00000583732 TBC1D17Q9HA65 648 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 WNT16Q9UBV4 365 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 COL4A3Q01955 1670 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 CACNA1HO95180 2353 aa16.69■□□□□ 0.26
SREBF1-222ENST00000583732 IGFBP6P24592 240 aaPredicted RBP16.68■□□□□ 0.26
SREBF1-222ENST00000583732 HTR4Q13639 388 aa16.68■□□□□ 0.26
SREBF1-222ENST00000583732 PPP2R5AQ15172 486 aa16.68■□□□□ 0.26
SREBF1-222ENST00000583732 DCAF4L1Q3SXM0 396 aa16.68■□□□□ 0.26
SREBF1-222ENST00000583732 NT5DC1Q5TFE4 455 aa16.68■□□□□ 0.26
SREBF1-222ENST00000583732 IFT74Q96LB3 600 aa16.68■□□□□ 0.26
SREBF1-222ENST00000583732 BHMT2Q9H2M3 363 aa16.68■□□□□ 0.26
SREBF1-222ENST00000583732 GOLGA2P5Q9HBQ8 144 aa16.68■□□□□ 0.26
SREBF1-222ENST00000583732 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■□□ 17.8
SREBF1-222ENST00000583732 LIMCH1Q9UPQ0 1083 aa16.68■□□□□ 0.26
SREBF1-222ENST00000583732 PAPLNO95428 1278 aa16.67■□□□□ 0.26
SREBF1-222ENST00000583732 C1RP00736 705 aa16.67■□□□□ 0.26
SREBF1-222ENST00000583732 DCNP07585 359 aaKnown RBP16.67■□□□□ 0.26
SREBF1-222ENST00000583732 ORC2Q13416 577 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-222ENST00000583732 ATF7IP2Q5U623 682 aa16.67■□□□□ 0.26
SREBF1-222ENST00000583732 FAM184AQ8NB25 1140 aa16.67■□□□□ 0.26
SREBF1-222ENST00000583732 SLC7A14Q8TBB6 771 aa16.67■□□□□ 0.26
SREBF1-222ENST00000583732 NXPE3Q969Y0 559 aa16.67■□□□□ 0.26
SREBF1-222ENST00000583732 RPP25Q9BUL9 199 aaKnown RBP16.67■□□□□ 0.26
SREBF1-222ENST00000583732 FOXP1Q9H334 677 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-222ENST00000583732 ARHGEF3Q9NR81 526 aa16.67■□□□□ 0.26
SREBF1-222ENST00000583732 DDX19AQ9NUU7 478 aaKnown RBP16.67■□□□□ 0.26
SREBF1-222ENST00000583732 LRWD1Q9UFC0 647 aa16.67■□□□□ 0.26
SREBF1-222ENST00000583732 NOL7Q9UMY1 257 aaKnown RBP16.67■□□□□ 0.26
SREBF1-222ENST00000583732 KIAA1024Q9UPX6 916 aa16.67■□□□□ 0.26
SREBF1-222ENST00000583732 ZFHX2Q9C0A1 2572 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-222ENST00000583732 ANHXE9PGG2 379 aa16.66■□□□□ 0.26
SREBF1-222ENST00000583732 I3L4J1 428 aa16.66■□□□□ 0.26
SREBF1-222ENST00000583732 OR1D2P34982 312 aa16.66■□□□□ 0.26
SREBF1-222ENST00000583732 CLCNKBP51801 687 aa16.66■□□□□ 0.26
SREBF1-222ENST00000583732 ELAVL2Q12926 359 aaKnown RBP16.66■□□□□ 0.26
SREBF1-222ENST00000583732 PARM1Q6UWI2 310 aa16.66■□□□□ 0.26
SREBF1-222ENST00000583732 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-222ENST00000583732 CEP120Q8N960 986 aa16.66■□□□□ 0.26
SREBF1-222ENST00000583732 SNX29Q8TEQ0 813 aa16.66■□□□□ 0.26
SREBF1-222ENST00000583732 FGF14Q92915 247 aa16.66■□□□□ 0.26
SREBF1-222ENST00000583732 HCFC1R1Q9NWW0 138 aa16.66■□□□□ 0.26
SREBF1-222ENST00000583732 MIA3Q5JRA6 1907 aa16.66■□□□□ 0.26
SREBF1-222ENST00000583732 CFAP54Q96N23 3096 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 CCDC169A6NNP5 214 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 XYLBO75191 536 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 B3GAT3O94766 335 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 HNRNPA1P09651 372 aaKnown RBP eCLIP16.65■□□□□ 0.26
SREBF1-222ENST00000583732 TKTP29401 623 aaKnown RBP16.65■□□□□ 0.26
SREBF1-222ENST00000583732 BRCC3P46736 316 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 FXR2P51116 673 aaKnown RBP eCLIP16.65■□□□□ 0.26
SREBF1-222ENST00000583732 OSTNP61366 133 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 AXDND1Q5T1B0 1012 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-222ENST00000583732 DCLRE1AQ6PJP8 1040 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 ADSSL1Q8N142 457 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 FBXO18Q8NFZ0 1043 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 ITFG1Q8TB96 612 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 KIFAP3Q92845 792 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 PPP1R10Q96QC0 940 aaKnown RBP16.65■□□□□ 0.26
SREBF1-222ENST00000583732 LLPHQ9BRT6 129 aaKnown RBP16.65■□□□□ 0.26
SREBF1-222ENST00000583732 FOXQ1Q9C009 403 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 CDH7Q9ULB5 785 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 CDY1Q9Y6F8 540 aa16.65■□□□□ 0.26
SREBF1-222ENST00000583732 PP2D1A8MPX8 630 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 E9PMD0 336 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 K7ERI5 159 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 HARSP12081 509 aaKnown RBP16.64■□□□□ 0.25
SREBF1-222ENST00000583732 MUTP22033 750 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 RBM25P49756 843 aaKnown RBP16.64■□□□□ 0.25
SREBF1-222ENST00000583732 EFNA5P52803 228 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 PEX3P56589 373 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 ZNF568Q3ZCX4 644 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 PDXDC1Q6P996 788 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 RSPO2Q6UXX9 243 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-222ENST00000583732 C4orf32Q8N8J7 132 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 C3orf58Q8NDZ4 430 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 ING5Q8WYH8 240 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 FGF13Q92913 245 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 DDX27Q96GQ7 796 aaKnown RBP16.64■□□□□ 0.25
SREBF1-222ENST00000583732 SNX27Q96L92 541 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 CDT1Q9H211 546 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 MTRRQ9UBK8 725 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 R4GN57 208 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 PHLPP2Q6ZVD8 1323 aa16.64■□□□□ 0.25
SREBF1-222ENST00000583732 CITO14578 2027 aa16.63■□□□□ 0.25
SREBF1-222ENST00000583732 NOTCH4Q99466 2003 aa16.63■□□□□ 0.25
SREBF1-222ENST00000583732 TMEM189-UBE2V1I3L0A0 370 aa16.63■□□□□ 0.25
SREBF1-222ENST00000583732 EIF5BO60841 1220 aaKnown RBP16.63■□□□□ 0.25
SREBF1-222ENST00000583732 HIP1RO75146 1068 aa16.63■□□□□ 0.25
SREBF1-222ENST00000583732 LRRN2O75325 713 aa16.63■□□□□ 0.25
SREBF1-222ENST00000583732 FGFR3P22607 806 aa16.63■□□□□ 0.25
SREBF1-222ENST00000583732 HOXA9P31269 272 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms