RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 CYSRT1A8MQ03 144 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 KCNAB3O43448 404 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 NRP2O60462 931 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 H2AFYO75367 372 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 PFKMP08237 780 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 AGXTP21549 392 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 MTNR1BP49286 362 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 ADCY7P51828 1080 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 ADAM15Q13444 863 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 SPIDRQ14159 915 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 ACAP1Q15027 740 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 ACAP2Q15057 778 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 ANO4Q32M45 955 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 ZBTB41Q5SVQ8 909 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 CCDC62Q6P9F0 684 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 CRELD2Q6UXH1 353 aaPredicted RBP4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 ELOA2Q8IYF1 753 aaPredicted RBP4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 CMTR2Q8IYT2 770 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 MYO1HQ8N1T3 1032 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 JPH3Q8WXH2 748 aaPredicted RBP4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 AUTS2Q8WXX7 1259 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 LPPQ93052 612 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 RPL10LQ96L21 214 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 AMNQ9BXJ7 453 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 RTFDC1Q9BY42 306 aaPredicted RBP4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 ANO3Q9BYT9 981 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 RHOBTB2Q9BYZ6 727 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 PITHD1Q9GZP4 211 aaPredicted RBP4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 ZNF277Q9NRM2 450 aaPredicted RBP4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 KCMF1Q9P0J7 381 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 ANKFY1Q9P2R3 1169 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 IP6K2Q9UHH9 426 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 DENND2AQ9ULE3 1009 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 SYNPO2Q9UMS6 1093 aa4.88□□□□□ -1.63
SMCHD1-209ENST00000583441 PRSS38A1L453 326 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 LCHNA4D1U4 455 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 ELL2O00472 640 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 RBMXL2O75526 392 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 SCAF4O95104 1147 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 CYP2C19P33261 490 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 RGS3P49796 1198 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 SRSF2Q01130 221 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 PCBP2Q15366 365 aaKnown RBP eCLIP4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 PITRM1Q5JRX3 1037 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 GJC2Q5T442 439 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 KCNK18Q7Z418 384 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 BMP8AQ7Z5Y6 402 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 WDR75Q8IWA0 830 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 CMIPQ8IY22 773 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 CDYL2Q8N8U2 506 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 OR14C36Q8NHC7 312 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 TGFBRAP1Q8WUH2 860 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 EAF2Q96CJ1 260 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 HSPBAP1Q96EW2 488 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 HIST1H2AHQ96KK5 128 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 HIST1H2AJQ99878 128 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 TCF25Q9BQ70 676 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 QRSL1Q9H0R6 528 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 SLC6A15Q9H2J7 730 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 KCTD10Q9H3F6 313 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 CTDP1Q9Y5B0 961 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 PCDHB6Q9Y5E3 794 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 MYPNQ86TC9 1320 aa4.87□□□□□ -1.63
SMCHD1-209ENST00000583441 A0A0A6YYJ9 748 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 UBE2QL1A1L167 161 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 PRC1O43663 620 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 LPXNO60711 386 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 IPO13O94829 963 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 CLEC2LP0C7M8 214 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 PF4V1P10720 104 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 ATF3P18847 181 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 XPAP23025 273 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 ADKP55263 362 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 NRG3P56975 720 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 MUM1Q2TAK8 710 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 CT83Q5H943 113 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 TOR2AQ5JU69 321 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 KANK2Q63ZY3 851 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 CCSAPQ6IQ19 270 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 MFSD5Q6N075 450 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 MAGEB6Q8N7X4 407 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 ZNF384Q8TF68 577 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 TSR2Q969E8 191 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 MYEOVQ96EZ4 313 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 TEKT5Q96M29 485 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 AIFM3Q96NN9 605 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 ADGRE3Q9BY15 652 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 MTG2Q9H4K7 406 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 SYBUQ9NX95 663 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 ZBTB21Q9ULJ3 1066 aa4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 EPN1Q9Y6I3 576 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-209ENST00000583441 PCDHGA12O60330 932 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 OPHN1O60890 802 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 IL33O95760 270 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 IGLV2-14P01704 120 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 GYPEP15421 78 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 AKAP5P24588 427 aa4.85□□□□□ -1.63
SMCHD1-209ENST00000583441 ZFP36P26651 326 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms