RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 GPR150Q8NGU9 434 aa5.58□□□□□ -1.52
COPS3-217ENST00000583160 PHACTR3Q96KR7 559 aa5.58□□□□□ -1.52
COPS3-217ENST00000583160 WDR11Q9BZH6 1224 aa5.58□□□□□ -1.52
COPS3-217ENST00000583160 SERHL2Q9H4I8 314 aa5.58□□□□□ -1.52
COPS3-217ENST00000583160 CYP4F11Q9HBI6 524 aa5.58□□□□□ -1.52
COPS3-217ENST00000583160 DKK2Q9UBU2 259 aa5.58□□□□□ -1.52
COPS3-217ENST00000583160 MAP3K2Q9Y2U5 619 aa5.58□□□□□ -1.52
COPS3-217ENST00000583160 PCDHGA2Q9Y5H1 932 aa5.58□□□□□ -1.52
COPS3-217ENST00000583160 WASHC2AQ641Q2 1341 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 GRID2IPA4D2P6 1211 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 RHOBTB3O94955 611 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 RAP2AP10114 183 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 OSMP13725 252 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 IL2RBP14784 551 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 POU3F3P20264 500 aaPredicted RBP5.57□□□□□ -1.52
COPS3-217ENST00000583160 ZEB1P37275 1124 aaPredicted RBP5.57□□□□□ -1.52
COPS3-217ENST00000583160 MTNR1BP49286 362 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 RAP2BP61225 183 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 ERVK-21P61565 698 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 RRP12Q5JTH9 1297 aaKnown RBP5.57□□□□□ -1.52
COPS3-217ENST00000583160 AFMIDQ63HM1 303 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 HOXB13Q92826 284 aaPredicted RBP5.57□□□□□ -1.52
COPS3-217ENST00000583160 NEU1Q99519 415 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 MRI1Q9BV20 369 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 SENP6Q9GZR1 1112 aaPredicted RBP5.57□□□□□ -1.52
COPS3-217ENST00000583160 LDAHQ9H6V9 325 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 FPGT-TNNI3KV9GXZ4 949 aa5.57□□□□□ -1.52
COPS3-217ENST00000583160 PHLDB1Q86UU1 1377 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 UNC119BA6NIH7 251 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 HLA-DOAP06340 250 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 NANOS3P60323 173 aaKnown RBP5.56□□□□□ -1.52
COPS3-217ENST00000583160 GUCY1B3Q02153 619 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 TAP1Q03518 808 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 SEPT2Q15019 361 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 HECTD2Q5U5R9 776 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 AGAP9Q5VTM2 703 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 MED25Q71SY5 747 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 DNAJC10Q8IXB1 793 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 LCORLQ8N3X6 602 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 BEND2Q8NDZ0 799 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 SLC2A13Q96QE2 648 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 TMX1Q9H3N1 280 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 LANCL2Q9NS86 450 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 MOCS1Q9NZB8 636 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 DNM3Q9UQ16 869 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 ATP11BQ9Y2G3 1177 aa5.56□□□□□ -1.52
COPS3-217ENST00000583160 ENDOD1O94919 500 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 BMP5P22003 454 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 DDX6P26196 483 aaKnown RBP eCLIP5.55□□□□□ -1.52
COPS3-217ENST00000583160 GUCY1A2P33402 732 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 USP14P54578 494 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 RESTQ13127 1097 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 TSHZ3Q63HK5 1081 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 RHOT2Q8IXI1 618 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 ADAM2Q99965 735 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 TOR3AQ9H497 397 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 TMEM140Q9NV12 185 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 AJAP1Q9UKB5 411 aaPredicted RBP5.55□□□□□ -1.52
COPS3-217ENST00000583160 SIK3Q9Y2K2 1263 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 GPR45Q9Y5Y3 372 aa5.55□□□□□ -1.52
COPS3-217ENST00000583160 K7ESF4 209 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 POMCP01189 267 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 ATP5JP18859 108 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 FPR1P21462 350 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 ALDH1A3P47895 512 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 SLC6A9P48067 706 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 MGAT2Q10469 447 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 KLF1Q13351 362 aaPredicted RBP5.54□□□□□ -1.52
COPS3-217ENST00000583160 TP53BP2Q13625 1128 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 UBXN2BQ14CS0 331 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 Q6YL49 198 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 DDX42Q86XP3 938 aaKnown RBP eCLIP5.54□□□□□ -1.52
COPS3-217ENST00000583160 DRC7Q8IY82 874 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 CMTR2Q8IYT2 770 aaKnown RBP5.54□□□□□ -1.52
COPS3-217ENST00000583160 SUPT20HQ8NEM7 779 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 OR56A1Q8NGH5 318 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.54□□□□□ -1.52
COPS3-217ENST00000583160 KLHL11Q9NVR0 708 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 MCM8Q9UJA3 840 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 ACTL7AQ9Y615 435 aa5.54□□□□□ -1.52
COPS3-217ENST00000583160 PIPSLA2A3N6 862 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 MARCH11A6NNE9 402 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 FAM171A2A8MVW0 826 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 CFIP05156 583 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 ELANEP08246 267 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 AGXTP21549 392 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 MXRA7P84157 204 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 OTUD7BQ6GQQ9 843 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 MAPKAPK5Q8IW41 473 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 AMOTL1Q8IY63 956 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 CNTD1Q8N815 330 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 PPM1NQ8N819 430 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 OR2I1PQ8NGU4 316 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 CCHCR1Q8TD31 782 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 CASKIN2Q8WXE0 1202 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 CYFIP2Q96F07 1278 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 FUBP3Q96I24 572 aaKnown RBP eCLIP5.53□□□□□ -1.52
COPS3-217ENST00000583160 CRAMP1Q96RY5 1269 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 MYOCQ99972 504 aa5.53□□□□□ -1.52
COPS3-217ENST00000583160 REXO4Q9GZR2 422 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms