RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 UBA1P22314 1058 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RPL21P46778 160 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CCDC38Q502W7 563 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TMC3Q7Z5M5 1100 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CCDC25Q86WR0 208 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 JAMLQ86YT9 394 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CEP120Q8N960 986 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NT5C1BQ96P26 610 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 C11orf70Q9BRQ4 267 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ACAD9Q9H845 621 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PDLIM7Q9NR12 457 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RNF19AQ9NV58 838 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RNF14Q9UBS8 474 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ANAPC7Q9UJX3 599 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CD2APQ9Y5K6 639 aa11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 BRCA1P38398 1863 aaKnown RBP11.48□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RGPD3A6NKT7 1758 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RGPD4Q7Z3J3 1758 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MYO1CO00159 1063 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 USP2O75604 605 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CST3P01034 146 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 HLA-DRAP01903 254 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PSAPP07602 524 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 HSPA9P38646 679 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PEX5P50542 639 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TGFB2P61812 414 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GHRHRQ02643 423 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ZDHHC24Q6UX98 284 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SYCE1Q8N0S2 351 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GPD1LQ8N335 351 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 LMBR1Q8WVP7 490 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SPIRE2Q8WWL2 714 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MAGOHBQ96A72 148 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 EPB41L4BQ9H329 900 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ATP6V0A4Q9HBG4 840 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TMEM8AQ9HCN3 771 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TXNRD2Q9NNW7 524 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PPANQ9NQ55 473 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CHST7Q9NS84 486 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ANKEF1Q9NU02 776 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NOVA2Q9UNW9 492 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SNCAIPQ9Y6H5 919 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SYNGAP1Q96PV0 1343 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PI4K2BG5E9Z4 385 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RTN2O75298 545 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SUPT20HL2P0C7V6 817 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NR1D1P20393 614 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SFNP31947 248 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PIK3CAP42336 1068 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SSR1P43307 286 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PDE6CP51160 858 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MFAP3P55082 362 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 CETN1Q12798 172 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MTM1Q13496 603 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SUPT20HL1Q3ZLR7 823 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TMEM270Q6UE05 265 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SRLQ86TD4 932 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TMEM192Q8IY95 271 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ZNF302Q9NR11 478 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 NUB1Q9Y5A7 615 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MROH7Q68CQ1 1323 aa11.47□□□□□ -0.57
CDK5RAP3-225ENST00000582482 LOXHD1Q8IVV2 1947 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SPATA31C2B4DYI2 1134 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GOLGA8KD6RF30 607 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 IRF6O14896 467 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 B4GALT5O43286 388 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PTGIRP43119 386 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 PTENP60484 403 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ADCY2Q08462 1091 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 HSDL1Q3SXM5 330 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ALS2CLQ60I27 953 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 C12orf56Q8IXR9 622 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TAB3Q8N5C8 712 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ATP6V0A1Q93050 837 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 RNF25Q96BH1 459 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GPRASP2Q96D09 838 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 MFSD14AQ96MC6 490 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 SEMA4AQ9H3S1 761 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 C10orf88Q9H8K7 445 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 TJP2Q9UDY2 1190 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 ZNF112Q9UJU3 913 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 INTUQ9ULD6 942 aa11.46□□□□□ -0.57
CDK5RAP3-225ENST00000582482 GSTTP1A0A1W2PQM5 241 aa11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 EIF3HO15372 352 aaKnown RBP eCLIP11.46□□□□□ -0.581e-17■□□□□ 9
CDK5RAP3-225ENST00000582482 OPA1O60313 960 aa11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 SHOX2O60902 331 aaPredicted RBP11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 CAND2O75155 1236 aa11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 CDR2Q01850 454 aa11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 PPFIA1Q13136 1202 aa11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 CAPSQ13938 189 aa11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 SIX1Q15475 284 aaPredicted RBP11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 Q3C1V9 767 aa11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 HP1BP3Q5SSJ5 553 aaPredicted RBP11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 DCAF15Q66K64 600 aa11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 B4GALNT4Q76KP1 1039 aa11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 DDX23Q9BUQ8 820 aaKnown RBP11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 ADAM33Q9BZ11 813 aa11.46□□□□□ -0.58
CDK5RAP3-225ENST00000582482 RBAKQ9NYW8 714 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms