RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 TCEAL9Q9UHQ7 104 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 EID1Q9Y6B2 187 aa5.96□□□□□ -1.46
SMCHD1-204ENST00000581226 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 GOLGA6L6A8MZA4 724 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 PJA2O43164 708 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 TEX33O43247 280 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 SGTAO43765 313 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 ADRB1P08588 477 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 POU2F2P09086 479 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 SNRPA1P09661 255 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 ATP5JP18859 108 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 AKAP5P24588 427 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 ALDH1A3P47895 512 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 CLRN1P58418 232 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 RAP2BP61225 183 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 CDC42EP1Q00587 391 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 MTM1Q13496 603 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 VPS72Q15906 364 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 USP39Q53GS9 565 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 RRP12Q5JTH9 1297 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 C1QL3Q5VWW1 255 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 EFCAB12Q6NXP0 572 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 CATIPQ7Z7H3 387 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 DRC7Q8IY82 874 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 RNF169Q8NCN4 708 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 ZFP28Q8NHY6 868 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 EXTL1Q92935 676 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 TMX3Q96JJ7 454 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 CAMKK2Q96RR4 588 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 CDH19Q9H159 772 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 RUVBL1Q9Y265 456 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 PCDHB1Q9Y5F3 818 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 CFAP20Q9Y6A4 193 aaKnown RBP5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 XDHP47989 1333 aa5.95□□□□□ -1.46
SMCHD1-204ENST00000581226 KLRG2A4D1S0 409 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 DTNBO60941 627 aa5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 ATP8B2P98198 1209 aa5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 TARDBPQ13148 414 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 NRN1LQ496H8 165 aa5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 OTUD7BQ6GQQ9 843 aa5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 USP45Q70EL2 814 aa5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 TTC7BQ86TV6 843 aa5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 C1orf210Q8IVY1 113 aa5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 SH3RF3Q8TEJ3 882 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 CLPTM1LQ96KA5 538 aa5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 AURKAIP1Q9NWT8 199 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 PNMA8BQ9ULN7 279 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 PNPLA7Q6ZV29 1317 aa5.94□□□□□ -1.46
SMCHD1-204ENST00000581226 PLSCR1O15162 318 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 RFPL1O75677 317 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 MGAT1P26572 445 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 CYP2C19P33261 490 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 CREMQ03060 361 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 PPP2R5AQ15172 486 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 LRRC41Q15345 812 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 CSRP2Q16527 193 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 NFE2Q16621 373 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 ATP2B3Q16720 1220 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 ATXN7L2Q5T6C5 722 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 NAIF1Q69YI7 327 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 DRICH1Q6PGQ1 229 aaPredicted RBP5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 HTR3DQ70Z44 454 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 TPH2Q8IWU9 490 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 CHPFQ8IZ52 775 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 PRR18Q8N4B5 295 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 OR10H5Q8NGA6 315 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 MYOCQ99972 504 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 GTPBP4Q9BZE4 634 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 METTL14Q9HCE5 456 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 SLC23A1Q9UHI7 598 aa5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 NOB1Q9ULX3 412 aaKnown RBP5.93□□□□□ -1.46
SMCHD1-204ENST00000581226 C1QTNF3-AMACRE9PGA6 284 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 POMCP01189 267 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 CTXN1P60606 82 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 DSC2Q02487 901 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 IFIT1BQ5T764 474 aaKnown RBP5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 ZNF529Q6P280 563 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 GADL1Q6ZQY3 521 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 SPRED1Q7Z699 444 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 TMPRSS6Q8IU80 811 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 PLXDC1Q8IUK5 500 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 IL17DQ8TAD2 202 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 IFI44Q8TCB0 444 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 NSUN6Q8TEA1 469 aaKnown RBP5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 PHACTR3Q96KR7 559 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 NDC1Q9BTX1 674 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 KLHL42Q9P2K6 505 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 EIF2B4Q9UI10 523 aaKnown RBP5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 SORCS3Q9UPU3 1222 aa5.92□□□□□ -1.46
SMCHD1-204ENST00000581226 OFD1O75665 1012 aa5.91□□□□□ -1.46
SMCHD1-204ENST00000581226 SCGB1D2O95969 90 aa5.91□□□□□ -1.46
SMCHD1-204ENST00000581226 FXR1P51114 621 aaKnown RBP eCLIP5.91□□□□□ -1.46
SMCHD1-204ENST00000581226 ZNF280AP59817 542 aaPredicted RBP5.91□□□□□ -1.46
SMCHD1-204ENST00000581226 RAB39AQ14964 217 aa5.91□□□□□ -1.46
SMCHD1-204ENST00000581226 UBXN2BQ14CS0 331 aa5.91□□□□□ -1.46
SMCHD1-204ENST00000581226 PGS1Q32NB8 556 aa5.91□□□□□ -1.46
SMCHD1-204ENST00000581226 KHDC1Q4VXA5 237 aaKnown RBP5.91□□□□□ -1.46
SMCHD1-204ENST00000581226 THEMIS2Q5TEJ8 643 aa5.91□□□□□ -1.46
SMCHD1-204ENST00000581226 RNF207Q6ZRF8 634 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms