RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SURF1Q15526 300 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 LMBRD2Q68DH5 695 aaPredicted RBP15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CCDC51Q96ER9 411 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 OSBPL7Q9BZF2 842 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 MCOLN1Q9GZU1 580 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ERVK-5Q9HDB9 667 aa15□□□□□ -0.01
CDK5RAP3-219ENST00000580670 AKR1B15C9JRZ8 316 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 P4HA2O15460 535 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 SLC9A1P19634 815 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PON1P27169 355 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CASP14P31944 242 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 KRT39Q6A163 491 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TWF2Q6IBS0 349 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TRAF7Q6Q0C0 670 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ANKRD33Q7Z3H0 272 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 USP38Q8NB14 1042 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CCDC150Q8NCX0 1101 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ZNF516Q92618 1163 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 IQCDQ96DY2 449 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ACAP3Q96P50 834 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CCDC94Q9BW85 323 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PADI3Q9ULW8 664 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 SQORQ9Y6N5 450 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 KIAA0100Q14667 2235 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PTPRJQ12913 1337 aa14.99□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TTC26A0AVF1 554 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 DCDC2CA8MYV0 355 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 EPHB6O15197 1021 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PMM2O15305 246 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 IL18RAPO95256 599 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ACTN1P12814 892 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 SELPP16109 830 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 FXR1P51114 621 aaKnown RBP eCLIP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ADKP55263 362 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 POU5F1Q01860 360 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 APBA1Q02410 837 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TRIM60Q495X7 471 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 FIGNQ5HY92 759 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 UBXN11Q5T124 520 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 SV2AQ7L0J3 742 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 LRRC8DQ7L1W4 858 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 MYRIPQ8NFW9 859 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PAWRQ96IZ0 340 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 FAM84AQ96KN4 292 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TTYH3Q9C0H2 523 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 C11orf49Q9H6J7 331 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CHST12Q9NRB3 414 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CAPN11Q9UMQ6 739 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 LACTBL1A8MY62 500 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 MFAP3LO75121 409 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ZSCAN20P17040 1043 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GTF2F1P35269 517 aaKnown RBP eCLIP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 SLC10A6Q3KNW5 377 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 EPC2Q52LR7 807 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 C1orf53Q5VUE5 145 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TRIM65Q6PJ69 517 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 WDR49Q8IV35 697 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TC2NQ8N9U0 490 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 EHBP1Q8NDI1 1231 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CACTINQ8WUQ7 758 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ZNF830Q96NB3 372 aaPredicted RBP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 INTS2Q9H0H0 1204 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 NXF3Q9H4D5 531 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PLCB1Q9NQ66 1216 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 SNTG2Q9NY99 539 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 LUC7L2Q9Y383 392 aaKnown RBP14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 HES2Q9Y543 173 aa14.98□□□□□ -0.01
CDK5RAP3-219ENST00000580670 RNF225M0QZC1 329 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 MEFVO15553 781 aaPredicted RBP14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 NOL4O94818 638 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CAPN2P17655 700 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 YARSP54577 528 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TFAMQ00059 246 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TLE2Q04725 743 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 BIRC3Q13489 604 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 MBTPS1Q14703 1052 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TDRD10Q5VZ19 366 aaKnown RBP14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 C15orf39Q6ZRI6 1047 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CNGA4Q8IV77 575 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 LRRC8AQ8IWT6 810 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 OR5B17Q8NGF7 314 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 TOX2Q96NM4 488 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 APOL6Q9BWW8 343 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 GANQ9H2C0 597 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 SPTLC3Q9NUV7 552 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ATP11BQ9Y2G3 1177 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 IPPQ9Y573 584 aa14.97□□□□□ -0.01
CDK5RAP3-219ENST00000580670 A0A1W2PQJ5 194 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 PITPNM1O00562 1244 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 C4BPAP04003 597 aaKnown RBP14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 KRT9P35527 623 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 AP3M2P53677 418 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 FAAP100Q0VG06 881 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 DUOXA2Q1HG44 320 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 ZACNQ401N2 412 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 KLHDC7AQ5VTJ3 777 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 DPY19L2P1Q6NXN4 242 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 CACNA2D4Q7Z3S7 1137 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 EFCAB13Q8IY85 973 aa14.96□□□□□ -0.01
CDK5RAP3-219ENST00000580670 FBXL13Q8NEE6 735 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms