RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 VPS18Q9P253 973 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 BAG5Q9UL15 447 aa10.84□□□□□ -0.67
MSI2-209ENST00000579483 RSPH10B2B2RC85 870 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 ZWINTO95229 277 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 RSPH10BP0C881 870 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 CAPN2P17655 700 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 GARTP22102 1010 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 BCAR1P56945 870 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 TAF1BQ53T94 588 aaPredicted RBP10.83□□□□□ -0.68
MSI2-209ENST00000579483 MPZL3Q6UWV2 235 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 THG1LQ9NWX6 298 aaKnown RBP10.83□□□□□ -0.68
MSI2-209ENST00000579483 ARHGEF28Q8N1W1 1705 aaKnown RBP10.83□□□□□ -0.68
MSI2-209ENST00000579483 CAMTA1Q9Y6Y1 1673 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 NDUFA10O95299 355 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 DDX5P17844 614 aaKnown RBP10.83□□□□□ -0.68
MSI2-209ENST00000579483 PAX3P23760 479 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 GUCY1A2P33402 732 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 GTF2F1P35269 517 aaKnown RBP eCLIP10.83□□□□□ -0.68
MSI2-209ENST00000579483 STX1BP61266 288 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 GRIK4Q16099 956 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 MAP3K21Q5TCX8 1036 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 PPFIBP2Q8ND30 876 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 CAPNS2Q96L46 248 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 TMEM8AQ9HCN3 771 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 PP2D1A8MPX8 630 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 PARNO95453 639 aaKnown RBP10.83□□□□□ -0.68
MSI2-209ENST00000579483 LCP1P13796 627 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 SLC11A2P49281 568 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 CASP7P55210 303 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 TPI1P60174 286 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 GKAP1Q5VSY0 366 aaPredicted RBP10.83□□□□□ -0.68
MSI2-209ENST00000579483 DEFB128Q7Z7B8 93 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 RHOT1Q8IXI2 618 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 HPDLQ96IR7 371 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 UNC45AQ9H3U1 944 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 TRPV2Q9Y5S1 764 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 GNRH1P01148 92 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 TAC1P20366 129 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 LHX1P48742 406 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 ANTXR2P58335 489 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 RBBP5Q15291 538 aaKnown RBP10.83□□□□□ -0.68
MSI2-209ENST00000579483 PCBP1Q15365 356 aaKnown RBP eCLIP10.83□□□□□ -0.68
MSI2-209ENST00000579483 PASD1Q8IV76 773 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 CEP120Q8N960 986 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 SYT2Q8N9I0 419 aaPredicted RBP10.83□□□□□ -0.68
MSI2-209ENST00000579483 UPF1Q92900 1129 aaKnown RBP eCLIP10.83□□□□□ -0.68
MSI2-209ENST00000579483 PPP1R12CQ9BZL4 782 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 CATSPERBQ9H7T0 1116 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 TRPM5Q9NZQ8 1165 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 ZNF212Q9UDV6 495 aa10.83□□□□□ -0.68
MSI2-209ENST00000579483 FBXO2Q9UK22 296 aaPredicted RBP10.83□□□□□ -0.68
MSI2-209ENST00000579483 PODXLO00592 558 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 CLGNO14967 610 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 TOM1L1O75674 476 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 SLC1A1P43005 524 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 RASSF2P50749 326 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 NAA35Q5VZE5 725 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 NFRKBQ6P4R8 1299 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 VSIG1Q86XK7 387 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 SLAIN1Q8ND83 568 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 CHMP6Q96FZ7 201 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 DCUN1D1Q96GG9 259 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 FTHL17Q9BXU8 183 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 SLC7A5P2Q9GIP4 190 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 DHX35Q9H5Z1 703 aaKnown RBP10.82□□□□□ -0.68
MSI2-209ENST00000579483 BFARQ9NZS9 450 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 A0A1W2PQC6 194 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 FAM170AA1A519 330 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 RNASEH1O60930 286 aaKnown RBP10.82□□□□□ -0.68
MSI2-209ENST00000579483 HMGCRP04035 888 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 PTGISQ16647 500 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 ZNF677Q86XU0 584 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 TAB3Q8N5C8 712 aaPredicted RBP10.82□□□□□ -0.68
MSI2-209ENST00000579483 ATP6V0D2Q8N8Y2 350 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 USP13Q92995 863 aaPredicted RBP10.82□□□□□ -0.68
MSI2-209ENST00000579483 FAF2Q96CS3 445 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 KPNA1P52294 538 aaPredicted RBP10.82□□□□□ -0.68
MSI2-209ENST00000579483 PTPROQ16827 1216 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 FMR1NBQ8N0W7 255 aaPredicted RBP10.82□□□□□ -0.68
MSI2-209ENST00000579483 GPT2Q8TD30 523 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 SENP6Q9GZR1 1112 aaPredicted RBP10.82□□□□□ -0.68
MSI2-209ENST00000579483 VCXQ9H320 206 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 PTPN22Q9Y2R2 807 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 UNCXA6NJT0 531 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 IRF6O14896 467 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 EVI5O60447 810 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 ZC3H11AO75152 810 aaKnown RBP eCLIP10.82□□□□□ -0.68
MSI2-209ENST00000579483 SULT1E1P49888 294 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 CAV1Q03135 178 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 PGM5Q15124 567 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 FAM110CQ1W6H9 321 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 CTXN3Q4LDR2 81 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 C11orf57Q6ZUT1 292 aaPredicted RBP10.82□□□□□ -0.68
MSI2-209ENST00000579483 ZNF564Q8TBZ8 553 aaPredicted RBP10.82□□□□□ -0.68
MSI2-209ENST00000579483 MCUR1Q96AQ8 359 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 FOPNLQ96NB1 174 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 TARS2Q9BW92 718 aaKnown RBP10.82□□□□□ -0.68
MSI2-209ENST00000579483 DPP3Q9NY33 737 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 TBX20Q9UMR3 447 aa10.82□□□□□ -0.68
MSI2-209ENST00000579483 LOC102724159A0A0B4J2E5 919 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms