RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 CXCL8P10145 99 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 CCNE1P24864 410 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 AFF1P51825 1210 aaKnown RBP16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 PPP2R3AQ06190 1150 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 GRIK3Q13003 919 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 NFKBIBQ15653 356 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 ENOX2Q16206 610 aaKnown RBP16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 PPP2R2DQ66LE6 453 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 RDH13Q8NBN7 331 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 GSTCDQ8NEC7 633 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 CLP1Q92989 425 aaKnown RBP16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 P2RX5Q93086 422 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 SNX27Q96L92 541 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 SAMD11Q96NU1 681 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 TGS1Q96RS0 853 aaKnown RBP16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 CWH43Q9H720 699 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 CNTN3Q9P232 1028 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 DACH1Q9UI36 760 aa16.93■□□□□ 0.3
SLC6A4-205ENST00000579221 TTC26A0AVF1 554 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 BICDL2A1A5D9 508 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 TULP1O00294 542 aaPredicted RBP16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 IL18RAPO95256 599 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 ALDH2P05091 517 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 KCNE1P15382 129 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 CD44P16070 742 aaKnown RBP16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 LAG3P18627 525 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 BMPR1AP36894 532 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 ERVK-21P61565 698 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 TAP1Q03518 808 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 LRRC63Q05C16 580 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 ADAM9Q13443 819 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 EDRF1Q3B7T1 1238 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 ANKRD40Q6AI12 368 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 KLHL10Q6JEL2 608 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 NELFBQ8WX92 580 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 FBXL18Q96ME1 805 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 ASB7Q9H672 318 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 NRDE2Q9H7Z3 1164 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 SLC38A7Q9NVC3 462 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 FRMD4BQ9Y2L6 1034 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 PCDHB12Q9Y5F1 795 aa16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.92■□□□□ 0.3
SLC6A4-205ENST00000579221 TMEM265A0A087WTH1 108 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 SOX1O00570 391 aaPredicted RBP16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 PTGESO14684 152 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 DDHD2O94830 711 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 RB1P06400 928 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 ALDH7A1P49419 539 aaKnown RBP16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 SURF1Q15526 300 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 ZCWPW2Q504Y3 356 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 ZNF280BQ86YH2 543 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 ZSWIM2Q8NEG5 633 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 ZNF558Q96NG5 402 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 TMEM175Q9BSA9 504 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 CXCL16Q9H2A7 254 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 ZNF576Q9H609 170 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 RBAKQ9NYW8 714 aaPredicted RBP16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 DERAQ9Y315 318 aa16.91■□□□□ 0.3
SLC6A4-205ENST00000579221 PTPRSQ13332 1948 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 CETN3O15182 167 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 MEFVO15553 781 aaPredicted RBP16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 XPOTO43592 962 aaKnown RBP16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 ARHGEF15O94989 841 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 NR2F2P24468 414 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 BCAR1P56945 870 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 FKBP3Q00688 224 aaKnown RBP16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 PAK1Q13153 545 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 TUSC3Q13454 348 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 SNRNP35Q16560 246 aaKnown RBP16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 CT47A1Q5JQC4 288 aaPredicted RBP16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 GLRA4Q5JXX5 417 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 CEP135Q66GS9 1140 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 GPR153Q6NV75 609 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 KCNT2Q6UVM3 1135 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 CBWD2Q8IUF1 395 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 BRSK2Q8IWQ3 736 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 COLGALT2Q8IYK4 626 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 COLGALT1Q8NBJ5 622 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 KIF12Q96FN5 646 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 LRCH3Q96II8 777 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 PPP1R10Q96QC0 940 aaKnown RBP16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 PLVAPQ9BX97 442 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 CTNND2Q9UQB3 1225 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 FAN1Q9Y2M0 1017 aa16.9■□□□□ 0.3
SLC6A4-205ENST00000579221 ZC3H11AO75152 810 aaKnown RBP eCLIP16.89■□□□□ 0.294e-7■■■■□ 24.6
SLC6A4-205ENST00000579221 GALTP07902 379 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 CTNNB1P35222 781 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 OR1G1P47890 313 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 DSC1Q08554 894 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 EPC2Q52LR7 807 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 ZNF697Q5TEC3 545 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 JADE1Q6IE81 842 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 FOXR2Q6PJQ5 311 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 NT5DC4Q86YG4 428 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 CACTINQ8WUQ7 758 aaKnown RBP16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 MFSD14AQ96MC6 490 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 UROC1Q96N76 676 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 ZMAT2Q96NC0 199 aaKnown RBP16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 C17orf80Q9BSJ5 609 aa16.89■□□□□ 0.29
SLC6A4-205ENST00000579221 COLEC11Q9BWP8 271 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms