RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 CEP120Q8N960 986 aa16.25■□□□□ 0.19
SS18-212ENST00000579061 ZBTB45Q96K62 511 aaPredicted RBP16.25■□□□□ 0.19
SS18-212ENST00000579061 ACAP3Q96P50 834 aa16.25■□□□□ 0.19
SS18-212ENST00000579061 KLHL5Q96PQ7 755 aa16.25■□□□□ 0.19
SS18-212ENST00000579061 FIZ1Q96SL8 496 aa16.25■□□□□ 0.19
SS18-212ENST00000579061 ST6GALNAC4Q9H4F1 302 aa16.25■□□□□ 0.19
SS18-212ENST00000579061 RXFP1Q9HBX9 757 aa16.25■□□□□ 0.19
SS18-212ENST00000579061 CD320Q9NPF0 282 aa16.25■□□□□ 0.19
SS18-212ENST00000579061 TFIP11Q9UBB9 837 aaKnown RBP16.25■□□□□ 0.19
SS18-212ENST00000579061 SF3B1O75533 1304 aaKnown RBP eCLIP16.24■□□□□ 0.194e-6■■■■■ 96
SS18-212ENST00000579061 CASTOR2A6NHX0 329 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 TMEM189-UBE2V1I3L0A0 370 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 K7ENM7 598 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 CLDN3O15551 220 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 TADA2AO75478 443 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 CNPP09543 421 aaKnown RBP16.24■□□□□ 0.19
SS18-212ENST00000579061 KCNE1P15382 129 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 SSTR3P32745 418 aaPredicted RBP16.24■□□□□ 0.19
SS18-212ENST00000579061 GTF2BQ00403 316 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 ITIH3Q06033 890 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 ELAVL2Q12926 359 aaKnown RBP16.24■□□□□ 0.19
SS18-212ENST00000579061 TAS1R1Q7RTX1 841 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 ZBTB33Q86T24 672 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 SNX27Q96L92 541 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 UROC1Q96N76 676 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 PAAF1Q9BRP4 392 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 GPR62Q9BZJ7 368 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 CXCL16Q9H2A7 254 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.24■□□□□ 0.19
SS18-212ENST00000579061 SLC38A7Q9NVC3 462 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 SEL1LQ9UBV2 794 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 TBX20Q9UMR3 447 aa16.24■□□□□ 0.19
SS18-212ENST00000579061 SMIM28A0A1B0GU29 152 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 F8W810 466 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 CUTAO60888 179 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 ADH1AP07327 375 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 EPCAMP16422 314 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 KLRC2P26717 231 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 STAT6P42226 847 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 CLCN4P51793 760 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 CREMQ03060 361 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 KYAT1Q16773 422 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 KIAA1841Q6NSI8 718 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 DCLRE1AQ6PJP8 1040 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 DDX12PQ92771 950 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 BICD1Q96G01 975 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 PHF7Q9BWX1 381 aaPredicted RBP16.23■□□□□ 0.19
SS18-212ENST00000579061 ZHX3Q9H4I2 956 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 CNTN3Q9P232 1028 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 FNIP2Q9P278 1114 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 ANKFY1Q9P2R3 1169 aa16.23■□□□□ 0.19
SS18-212ENST00000579061 VWA8A3KMH1 1905 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 A0A087X0B3 334 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 MYMKA6NI61 221 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 HNRNPDLO14979 420 aaKnown RBP16.22■□□□□ 0.19
SS18-212ENST00000579061 KIF4AO95239 1232 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 GAP43P17677 238 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 LIG4P49917 911 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 OSTNP61366 133 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 CBX2Q14781 532 aaPredicted RBP16.22■□□□□ 0.19
SS18-212ENST00000579061 GLRA4Q5JXX5 417 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 FOXD4L5Q5VV16 416 aaPredicted RBP16.22■□□□□ 0.19
SS18-212ENST00000579061 CES5AQ6NT32 575 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 DYMQ7RTS9 669 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 MAP4K3Q8IVH8 894 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 SPRYD3Q8NCJ5 442 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 KCNG4Q8TDN1 519 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 FOXD4L4Q8WXT5 416 aaPredicted RBP16.22■□□□□ 0.19
SS18-212ENST00000579061 HVCN1Q96D96 273 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 DNAJC19Q96DA6 116 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 DDX27Q96GQ7 796 aaKnown RBP16.22■□□□□ 0.19
SS18-212ENST00000579061 NECTIN4Q96NY8 510 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 ADAM7Q9H2U9 754 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 CUEDC2Q9H467 287 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 PLEKHA5Q9HAU0 1116 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 CACNG4Q9UBN1 327 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 DPP7Q9UHL4 492 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 CFAP45Q9UL16 551 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.22■□□□□ 0.19
SS18-212ENST00000579061 PLXNA3P51805 1871 aa16.22■□□□□ 0.19
SS18-212ENST00000579061 C2CD2LO14523 706 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 TEX28O15482 410 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 CLTAP09496 248 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 NMT1P30419 496 aaKnown RBP16.21■□□□□ 0.19
SS18-212ENST00000579061 MTHFRP42898 656 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 MATR3P43243 847 aaKnown RBP eCLIP16.21■□□□□ 0.19
SS18-212ENST00000579061 PKP1Q13835 747 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 UPP1Q16831 310 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 SLC10A6Q3KNW5 377 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 PDXDC1Q6P996 788 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 ELMSAN1Q6PJG2 1045 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 ZNF720Q7Z2F6 126 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 HDAC7Q8WUI4 952 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 RABGGTAQ92696 567 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 FBXL18Q96ME1 805 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 C1QTNF1Q9BXJ1 281 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 LRRC27Q9C0I9 530 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 HAPLN2Q9GZV7 340 aa16.21■□□□□ 0.19
SS18-212ENST00000579061 FRMD3A2A2Y4 597 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 LOC730098B7Z3J9 87 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms