RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 RILPL1Q5EBL4 403 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 LIN9Q5TKA1 542 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CEP120Q8N960 986 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 RSAD2Q8WXG1 361 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ATOH1Q92858 354 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CDK5RAP3Q96JB5 506 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TMX3Q96JJ7 454 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 DRC1Q96MC2 740 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TCHPQ9BT92 498 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 RUSC1Q9BVN2 902 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CCDC94Q9BW85 323 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 MRPL4Q9BYD3 311 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 NT5C3AQ9H0P0 336 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 GOLGA2P5Q9HBQ8 144 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ZDHHC7Q9NXF8 308 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 DUSP12Q9UNI6 340 aa10.12□□□□□ -0.79
CDK5RAP3-211ENST00000578996 DENND4AQ7Z401 1863 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 KMT2EQ8IZD2 1858 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 VWA3AA6NCI4 1184 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 SFI1A8K8P3 1242 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 STK25O00506 426 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 SLC16A4O15374 487 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 NARSO43776 548 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 C8AP07357 584 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CFHP08603 1231 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 RFX1P22670 979 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PRPHP41219 470 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ELAVL2Q12926 359 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 NAB2Q15742 525 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PPM1LQ5SGD2 360 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 RINT1Q6NUQ1 792 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CYP26C1Q6V0L0 522 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 KCNK18Q7Z418 384 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TMEM105Q8N8V8 129 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ST13P5Q8NFI4 369 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 LNX1Q8TBB1 728 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 HDAC7Q8WUI4 952 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PIK3R5Q8WYR1 880 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ZNF707Q96C28 371 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 MYADMQ96S97 322 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ACO2Q99798 780 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CLSTN3Q9BQT9 956 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TARS2Q9BW92 718 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PRKD2Q9BZL6 878 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CDT1Q9H211 546 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TOPORSQ9NS56 1045 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 IGSF9Q9P2J2 1179 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ANKFY1Q9P2R3 1169 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TNFSF13BQ9Y275 285 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 MUC6Q6W4X9 2439 aa10.11□□□□□ -0.79
CDK5RAP3-211ENST00000578996 C2orf16Q68DN1 1984 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 I3L4J1 428 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CCL16O15467 120 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ADAM12O43184 909 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ZMYND10O75800 440 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CD2BP2O95400 341 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 IGFBP6P24592 240 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 OR1D2P34982 312 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 GRM5P41594 1212 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 MATR3P43243 847 aaKnown RBP eCLIP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 BRCC3P46736 316 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ATP2C1P98194 919 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CACNB1Q02641 598 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 STRN3Q13033 797 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ASTLQ6HA08 431 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PDXDC1Q6P996 788 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 LILRA6Q6PI73 481 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 GRASPQ7Z6J2 395 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 GPR65Q8IYL9 337 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 DAW1Q8N136 415 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 SIX5Q8N196 739 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 SLC7A14Q8TBB6 771 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 UROC1Q96N76 676 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PPP1R10Q96QC0 940 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 MMTAG2Q9BU76 263 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TMEM134Q9H6X4 195 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ARHGAP28Q9P2N2 729 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 FBXW11Q9UKB1 542 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CA14Q9ULX7 337 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 SMC3Q9UQE7 1217 aa10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 RBM19Q9Y4C8 960 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-211ENST00000578996 SMIM28A0A1B0GU29 152 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 PODXLO00592 558 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 GALR2O43603 387 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TRAPPC3O43617 180 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 MCF2P10911 925 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 FSHRP23945 695 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 TKTP29401 623 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 SMTNP53814 917 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 ARPP19P56211 112 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 NTHL1P78549 312 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 SOX4Q06945 474 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 MAPK7Q13164 816 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 DHX8Q14562 1220 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 UPP1Q16831 310 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 SEZ6Q53EL9 994 aa10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 CWF19L1Q69YN2 538 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP3-211ENST00000578996 DCLRE1AQ6PJP8 1040 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms