RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 KIF5AQ12840 1032 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 SURF1Q15526 300 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 GJB7Q6PEY0 223 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 TSHZ1Q6ZSZ6 1077 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 IFNLR1Q8IU57 520 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-218ENST00000578469 ARRDC4Q8NCT1 418 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 FBXL13Q8NEE6 735 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 LMO3Q8TAP4 145 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 FAM81BQ96LP2 452 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 FAM161BQ96MY7 647 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 GUCD1Q96NT3 240 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 KATNAL1Q9BW62 490 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 PCDHA13Q9Y5I0 950 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 OGTO15294 1046 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 MYL3P08590 195 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 HARSP12081 509 aaKnown RBP18.31■□□□□ 0.52
SREBF1-218ENST00000578469 TNNI1P19237 187 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 ARHGAP25P42331 645 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 PSEN2P49810 448 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 GPC3P51654 580 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 AP3M2P53677 418 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 CLDN10P78369 228 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 MBTD1Q05BQ5 628 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 MCL1Q07820 350 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 MFSD10Q14728 455 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 DRAP1Q14919 205 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-218ENST00000578469 FAM187BQ17R55 369 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 KIAA0753Q2KHM9 967 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 ASTE1Q2TB18 679 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-218ENST00000578469 CCDC122Q5T0U0 273 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 ATF7IP2Q5U623 682 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 MPZL3Q6UWV2 235 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 IRF2BP2Q7Z5L9 587 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 NT5C1BQ96P26 610 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.31■□□□□ 0.52
SREBF1-218ENST00000578469 IFIH1Q9BYX4 1025 aaKnown RBP18.31■□□□□ 0.52
SREBF1-218ENST00000578469 UBE2TQ9NPD8 197 aaPredicted RBP18.31■□□□□ 0.52
SREBF1-218ENST00000578469 RAB20Q9NX57 234 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 ATP11BQ9Y2G3 1177 aa18.31■□□□□ 0.52
SREBF1-218ENST00000578469 LAMA2P24043 3122 aaKnown RBP18.31■□□□□ 0.52
SREBF1-218ENST00000578469 F8VZ95 297 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 RBAK-RBAKDNI3L0D1 243 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 ZC3H11AO75152 810 aaKnown RBP eCLIP18.3■□□□□ 0.52
SREBF1-218ENST00000578469 DUSP11O75319 330 aaKnown RBP18.3■□□□□ 0.52
SREBF1-218ENST00000578469 EDN1P05305 212 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 SMIM10L2AP0DMW4 78 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 SMIM10L2BP0DMW5 78 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 MFAP3P55082 362 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 CHMP4BP1P59074 171 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 CYP27A1Q02318 531 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 ENOX2Q16206 610 aaKnown RBP18.3■□□□□ 0.52
SREBF1-218ENST00000578469 ZNF569Q5MCW4 686 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 C10orf76Q5T2E6 689 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 PHLDB3Q6NSJ2 640 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 CRELD2Q6UXH1 353 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-218ENST00000578469 SV2AQ7L0J3 742 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 ZBTB33Q86T24 672 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 ZNF410Q86VK4 478 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 MYRIPQ8NFW9 859 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 ZBTB10Q96DT7 871 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 SCLT1Q96NL6 688 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 POP1Q99575 1024 aaKnown RBP18.3■□□□□ 0.52
SREBF1-218ENST00000578469 HAPLN2Q9GZV7 340 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 SPC25Q9HBM1 224 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 SETD4Q9NVD3 440 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 AJAP1Q9UKB5 411 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-218ENST00000578469 TNFSF13BQ9Y275 285 aa18.3■□□□□ 0.52
SREBF1-218ENST00000578469 A0A087WZ62 844 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 GFPT2O94808 682 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 CYBAP13498 195 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 SLC18A3Q16572 532 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 FSCN1Q16658 493 aaKnown RBP18.29■□□□□ 0.52
SREBF1-218ENST00000578469 ARHGAP44Q17R89 818 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 ZNF568Q3ZCX4 644 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 MARCH8Q5T0T0 291 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 NFRKBQ6P4R8 1299 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 SRGAP1Q7Z6B7 1085 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 GPIHBP1Q8IV16 184 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 BRSK2Q8IWQ3 736 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 NLRP7Q8WX94 980 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 KAT2BQ92831 832 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 ZNF668Q96K58 619 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-218ENST00000578469 CGRRF1Q99675 332 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 FDXACB1Q9BRP7 624 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-218ENST00000578469 PRDM5Q9NQX1 630 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-218ENST00000578469 TOPORSQ9NS56 1045 aaPredicted RBP18.29■□□□□ 0.52
SREBF1-218ENST00000578469 GUCA1BQ9UMX6 200 aa18.29■□□□□ 0.52
SREBF1-218ENST00000578469 LTBP2Q14767 1821 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 A0A0U1RQJ8 604 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 SMIM35A0A1B0GVV1 85 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 HAS3O00219 553 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 RIOK3O14730 519 aaKnown RBP18.28■□□□□ 0.52
SREBF1-218ENST00000578469 VTNP04004 478 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 GNAT1P11488 350 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 PROZP22891 400 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 GFPT1Q06210 699 aaPredicted RBP18.28■□□□□ 0.52
SREBF1-218ENST00000578469 WDR44Q5JSH3 913 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 ENOSF1Q7L5Y1 443 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 KIAA0319LQ8IZA0 1049 aa18.28■□□□□ 0.52
SREBF1-218ENST00000578469 LMBR1Q8WVP7 490 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 791.5 ms