RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 C1RP00736 705 aa25.17■■□□□ 1.62
VAPA-205ENST00000578314 ADH1AP07327 375 aa25.17■■□□□ 1.62
VAPA-205ENST00000578314 SCP2P22307 547 aa25.17■■□□□ 1.62
VAPA-205ENST00000578314 PLA2G5P39877 138 aa25.17■■□□□ 1.62
VAPA-205ENST00000578314 YARSP54577 528 aaKnown RBP25.17■■□□□ 1.62
VAPA-205ENST00000578314 DHX8Q14562 1220 aaKnown RBP25.17■■□□□ 1.62
VAPA-205ENST00000578314 HERC4Q5GLZ8 1057 aaPredicted RBP25.17■■□□□ 1.62
VAPA-205ENST00000578314 SPECC1Q5M775 1068 aa25.17■■□□□ 1.62
VAPA-205ENST00000578314 ZBTB33Q86T24 672 aa25.17■■□□□ 1.62
VAPA-205ENST00000578314 LARP4BQ92615 738 aaKnown RBP25.17■■□□□ 1.62
VAPA-205ENST00000578314 RPGRIP1Q96KN7 1286 aa25.17■■□□□ 1.62
VAPA-205ENST00000578314 USP28Q96RU2 1077 aa25.17■■□□□ 1.62
VAPA-205ENST00000578314 TOPORSQ9NS56 1045 aaPredicted RBP25.17■■□□□ 1.62
VAPA-205ENST00000578314 SF3B1O75533 1304 aaKnown RBP eCLIP25.16■■□□□ 1.62
VAPA-205ENST00000578314 SMIM28A0A1B0GU29 152 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 TRIOO75962 3097 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 KIF4AO95239 1232 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 MTHFRP42898 656 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 CEBPZQ03701 1054 aaKnown RBP25.16■■□□□ 1.62
VAPA-205ENST00000578314 RARS2Q5T160 578 aaKnown RBP25.16■■□□□ 1.62
VAPA-205ENST00000578314 HAUS6Q7Z4H7 955 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 ZBTB45Q96K62 511 aaPredicted RBP25.16■■□□□ 1.62
VAPA-205ENST00000578314 B3GALT6Q96L58 329 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 CLIC6Q96NY7 704 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 PARVGQ9HBI0 331 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.16■■□□□ 1.624e-10■□□□□ 11.3
VAPA-205ENST00000578314 FNIP2Q9P278 1114 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 CCDC39Q9UFE4 941 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 MUTYHQ9UIF7 546 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 CDH22Q9UJ99 828 aa25.16■■□□□ 1.62
VAPA-205ENST00000578314 OSTNP61366 133 aa25.15■■□□□ 1.62
VAPA-205ENST00000578314 GLRA4Q5JXX5 417 aa25.15■■□□□ 1.62
VAPA-205ENST00000578314 ATAT1Q5SQI0 421 aa25.15■■□□□ 1.62
VAPA-205ENST00000578314 KANK3Q6NY19 840 aa25.15■■□□□ 1.62
VAPA-205ENST00000578314 HSCBQ8IWL3 235 aa25.15■■□□□ 1.62
VAPA-205ENST00000578314 MYCT1Q8N699 235 aa25.15■■□□□ 1.62
VAPA-205ENST00000578314 FAM122AQ96E09 287 aa25.15■■□□□ 1.62
VAPA-205ENST00000578314 RIPOR3Q96MK2 946 aa25.15■■□□□ 1.62
VAPA-205ENST00000578314 ACAP3Q96P50 834 aa25.15■■□□□ 1.62
VAPA-205ENST00000578314 SFXN1Q9H9B4 322 aa25.15■■□□□ 1.62
VAPA-205ENST00000578314 TMEM189-UBE2V1I3L0A0 370 aa25.14■■□□□ 1.62
VAPA-205ENST00000578314 FAM13AO94988 1023 aa25.14■■□□□ 1.62
VAPA-205ENST00000578314 PDIA4P13667 645 aaKnown RBP25.14■■□□□ 1.62
VAPA-205ENST00000578314 KCNE1P15382 129 aa25.14■■□□□ 1.62
VAPA-205ENST00000578314 NASPP49321 788 aaPredicted RBP25.14■■□□□ 1.62
VAPA-205ENST00000578314 MCL1Q07820 350 aa25.14■■□□□ 1.62
VAPA-205ENST00000578314 DCLRE1AQ6PJP8 1040 aa25.14■■□□□ 1.62
VAPA-205ENST00000578314 RIN2Q8WYP3 895 aaPredicted RBP25.14■■□□□ 1.62
VAPA-205ENST00000578314 UROC1Q96N76 676 aa25.14■■□□□ 1.62
VAPA-205ENST00000578314 POMKQ9H5K3 350 aa25.14■■□□□ 1.62
VAPA-205ENST00000578314 STK17AQ9UEE5 414 aa25.14■■□□□ 1.62
VAPA-205ENST00000578314 DPP7Q9UHL4 492 aa25.14■■□□□ 1.62
VAPA-205ENST00000578314 TDRD15B5MCY1 1934 aaKnown RBP25.14■■□□□ 1.61
VAPA-205ENST00000578314 KRT18P05783 430 aaKnown RBP25.13■■□□□ 1.61
VAPA-205ENST00000578314 CREMQ03060 361 aa25.13■■□□□ 1.61
VAPA-205ENST00000578314 ELAVL2Q12926 359 aaKnown RBP25.13■■□□□ 1.61
VAPA-205ENST00000578314 NOLC1Q14978 699 aaKnown RBP eCLIP25.13■■□□□ 1.61
VAPA-205ENST00000578314 RTP2Q5QGT7 225 aa25.13■■□□□ 1.61
VAPA-205ENST00000578314 GPR149Q86SP6 731 aa25.13■■□□□ 1.61
VAPA-205ENST00000578314 KRI1Q8N9T8 703 aaKnown RBP25.13■■□□□ 1.61
VAPA-205ENST00000578314 HASPINQ8TF76 798 aa25.13■■□□□ 1.61
VAPA-205ENST00000578314 SNX27Q96L92 541 aa25.13■■□□□ 1.61
VAPA-205ENST00000578314 FIZ1Q96SL8 496 aa25.13■■□□□ 1.61
VAPA-205ENST00000578314 TTPALQ9BTX7 342 aa25.13■■□□□ 1.61
VAPA-205ENST00000578314 CNTN3Q9P232 1028 aa25.13■■□□□ 1.61
VAPA-205ENST00000578314 TBX20Q9UMR3 447 aa25.13■■□□□ 1.61
VAPA-205ENST00000578314 CLDN3O15551 220 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 MEFVO15553 781 aaPredicted RBP25.12■■□□□ 1.61
VAPA-205ENST00000578314 TRAK2O60296 914 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 GLUD1P00367 558 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 WEE2P0C1S8 567 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 TXLNAP40222 546 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 CLCNKBP51801 687 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 UPP1Q16831 310 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 FAM171A1Q5VUB5 890 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 RRAGBQ5VZM2 374 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 CD300LGQ6UXG3 332 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 TMC5Q6UXY8 1006 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 CMASQ8NFW8 434 aaPredicted RBP25.12■■□□□ 1.61
VAPA-205ENST00000578314 HDAC7Q8WUI4 952 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 ZMAT2Q96NC0 199 aaKnown RBP25.12■■□□□ 1.61
VAPA-205ENST00000578314 SLC38A7Q9NVC3 462 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 ANKFY1Q9P2R3 1169 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 NR2E1Q9Y466 385 aa25.12■■□□□ 1.61
VAPA-205ENST00000578314 TBCAO75347 108 aaKnown RBP25.11■■□□□ 1.61
VAPA-205ENST00000578314 B3GAT3O94766 335 aa25.11■■□□□ 1.61
VAPA-205ENST00000578314 PIGRP01833 764 aa25.11■■□□□ 1.61
VAPA-205ENST00000578314 SOX4Q06945 474 aaPredicted RBP25.11■■□□□ 1.61
VAPA-205ENST00000578314 LILRA6Q6PI73 481 aa25.11■■□□□ 1.61
VAPA-205ENST00000578314 C15orf39Q6ZRI6 1047 aa25.11■■□□□ 1.61
VAPA-205ENST00000578314 LINC00301Q8NCQ3 95 aa25.11■■□□□ 1.61
VAPA-205ENST00000578314 LNX1Q8TBB1 728 aaPredicted RBP25.11■■□□□ 1.61
VAPA-205ENST00000578314 PIK3R5Q8WYR1 880 aa25.11■■□□□ 1.61
VAPA-205ENST00000578314 DDX27Q96GQ7 796 aaKnown RBP25.11■■□□□ 1.61
VAPA-205ENST00000578314 HAPLN2Q9GZV7 340 aa25.11■■□□□ 1.61
VAPA-205ENST00000578314 MAN1C1Q9NR34 630 aa25.11■■□□□ 1.61
VAPA-205ENST00000578314 K7ENM7 598 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 PAPLNO95428 1278 aa25.1■■□□□ 1.61
VAPA-205ENST00000578314 HARSP12081 509 aaKnown RBP25.1■■□□□ 1.61
VAPA-205ENST00000578314 IGFBP6P24592 240 aaPredicted RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms