RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 EHHADHQ08426 723 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 KCNA1Q09470 495 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 SLC10A6Q3KNW5 377 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 SEZ6Q53EL9 994 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 L1TD1Q5T7N2 865 aaKnown RBP21.11■□□□□ 0.97
SS18-208ENST00000577751 PLPP4Q5VZY2 271 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 UNC13DQ70J99 1090 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 TMC7Q7Z402 723 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 RNF168Q8IYW5 571 aaPredicted RBP21.11■□□□□ 0.97
SS18-208ENST00000577751 MRPL43Q8N983 215 aaKnown RBP21.11■□□□□ 0.97
SS18-208ENST00000577751 PAGE5Q96GU1 130 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 PAAF1Q9BRP4 392 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 COLEC11Q9BWP8 271 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 UBE2ZQ9H832 354 aaPredicted RBP21.11■□□□□ 0.97
SS18-208ENST00000577751 ENTPD7Q9NQZ7 604 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 CNTN3Q9P232 1028 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 PRG3Q9Y2Y8 225 aaPredicted RBP21.11■□□□□ 0.97
SS18-208ENST00000577751 IRAK3Q9Y616 596 aa21.11■□□□□ 0.97
SS18-208ENST00000577751 PVALEFA0A1B0GWK0 134 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 HIDE1A8MVS5 230 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 F8W810 466 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 OGTO15294 1046 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 CLTAP09496 248 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 CTSAP10619 480 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 KCNE1P15382 129 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 CASP1P29466 404 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 ANP32AP39687 249 aaKnown RBP21.1■□□□□ 0.97
SS18-208ENST00000577751 MATR3P43243 847 aaKnown RBP eCLIP21.1■□□□□ 0.97
SS18-208ENST00000577751 AFMP43652 599 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 CUL4BQ13620 913 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 KYAT1Q16773 422 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 GLRA4Q5JXX5 417 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 SLFN12LQ6IEE8 588 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 ZMAT2Q96NC0 199 aaKnown RBP21.1■□□□□ 0.97
SS18-208ENST00000577751 ACCSQ96QU6 501 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 BLZF1Q9H2G9 400 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 IKZF4Q9H2S9 585 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 GOLPH3LQ9H4A5 285 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 BRWD1Q9NSI6 2320 aa21.1■□□□□ 0.97
SS18-208ENST00000577751 TISP43B9A030 160 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 ADRB2P07550 413 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 LTBRP36941 435 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 TFF2Q03403 129 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 ADAM15Q13444 863 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 SMC1AQ14683 1233 aaKnown RBP21.09■□□□□ 0.97
SS18-208ENST00000577751 GRAMD1CQ8IYS0 662 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 EFHBQ8N7U6 833 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 FSIP1Q8NA03 581 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 HPS3Q969F9 1004 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 TLE6Q9H808 572 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 PLEKHA5Q9HAU0 1116 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 CACNG4Q9UBN1 327 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 EXOC7Q9UPT5 735 aa21.09■□□□□ 0.97
SS18-208ENST00000577751 TTC26A0AVF1 554 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 C2orf71A6NGG8 1288 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 CASTOR2A6NHX0 329 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 CXCL14O95715 111 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 ADSSP30520 456 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 TNFSF9P41273 254 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 NRIP1P48552 1158 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 MRPS5P82675 430 aaKnown RBP21.08■□□□□ 0.97
SS18-208ENST00000577751 KCNC3Q14003 757 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 HSP90AA2PQ14568 343 aaPredicted RBP21.08■□□□□ 0.97
SS18-208ENST00000577751 BMS1Q14692 1282 aaKnown RBP21.08■□□□□ 0.97
SS18-208ENST00000577751 DUSP6Q16828 381 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 ZBTB41Q5SVQ8 909 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 EPM2AIP1Q7L775 607 aaPredicted RBP21.08■□□□□ 0.97
SS18-208ENST00000577751 RBM23Q86U06 439 aaKnown RBP21.08■□□□□ 0.97
SS18-208ENST00000577751 GLIS3Q8NEA6 775 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 RABGGTAQ92696 567 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 ASB2Q96Q27 587 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 CDCA3Q99618 268 aaPredicted RBP21.08■□□□□ 0.97
SS18-208ENST00000577751 MSTO1Q9BUK6 570 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 IGFLR1Q9H665 355 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 TMEM206Q9H813 350 aa21.08■□□□□ 0.97
SS18-208ENST00000577751 CPSF3Q9UKF6 684 aaKnown RBP21.08■□□□□ 0.97
SS18-208ENST00000577751 PER2O15055 1255 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 LINC01565O15544 149 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 KLRC4O43908 158 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 LILRB3O75022 631 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 PRPF6O94906 941 aaKnown RBP21.07■□□□□ 0.96
SS18-208ENST00000577751 SOD2P04179 222 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 MYL1P05976 194 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 CXCL8P10145 99 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 POSTNQ15063 836 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 FAM26FQ5R3K3 315 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 STXBP4Q6ZWJ1 553 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 ZNF507Q8TCN5 953 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 UROC1Q96N76 676 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 HERC2P3Q9BVR0 1158 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 SLC38A7Q9NVC3 462 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 CLDND1Q9NY35 253 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 ADAM28Q9UKQ2 775 aa21.07■□□□□ 0.96
SS18-208ENST00000577751 AGO2Q9UKV8 859 aaKnown RBP21.07■□□□□ 0.96
SS18-208ENST00000577751 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.06■□□□□ 0.96
SS18-208ENST00000577751 FSD2A1L4K1 749 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 EIF3DO15371 548 aaKnown RBP eCLIP21.06■□□□□ 0.96
SS18-208ENST00000577751 ZNF202O95125 648 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 HOXD13P35453 343 aa21.06■□□□□ 0.96
SS18-208ENST00000577751 POU5F1Q01860 360 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms