RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 CASTOR2A6NHX0 329 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 C2CD2LO14523 706 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 TOM1L1O75674 476 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 PLCG1P19174 1290 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 NCKAP1LP55160 1127 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 RAD51AP2Q09MP3 1159 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 KARSQ15046 597 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 ATAT1Q5SQI0 421 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 RARS2Q5T160 578 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 MPZL3Q6UWV2 235 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 C15orf39Q6ZRI6 1047 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 GPR149Q86SP6 731 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 C12orf76Q8N812 135 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 HDAC7Q8WUI4 952 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 RABGGTAQ92696 567 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 RAD54LQ92698 747 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 B3GALT6Q96L58 329 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 RIPOR3Q96MK2 946 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 CCDC94Q9BW85 323 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 TOPORSQ9NS56 1045 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 FBXO2Q9UK22 296 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 SRPRBQ9Y5M8 271 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 WDFY4Q6ZS81 3184 aa13.65□□□□□ -0.22
CSNK1D-206ENST00000577578 DOCK8Q8NF50 2099 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 NPHP3-ACAD11A0A0J9YXS1 232 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 SMIM28A0A1B0GU29 152 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 H0YCG3 227 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 MEFVO15553 781 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 TADA2AO75478 443 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 KCNE1P15382 129 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 CREMQ03060 361 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 ELAVL2Q12926 359 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 STRN3Q13033 797 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 UPP1Q16831 310 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 RTP2Q5QGT7 225 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 KANK3Q6NY19 840 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 LILRA6Q6PI73 481 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 TMC5Q6UXY8 1006 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 USP49Q70CQ1 688 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 GPBP1Q86WP2 473 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 FEZF2Q8TBJ5 459 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 PIK3R5Q8WYR1 880 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 EDAQ92838 391 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 EPSTI1Q96J88 318 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 SNX27Q96L92 541 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 UROC1Q96N76 676 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 ZSCAN16Q9H4T2 348 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 DPP7Q9UHL4 492 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 USTQ9Y2C2 406 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 NR2E1Q9Y466 385 aa13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 ARIH1Q9Y4X5 557 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-206ENST00000577578 STX6O43752 255 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 GLUD1P00367 558 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 PIGRP01833 764 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 DDIT3P35638 169 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 YARSP54577 528 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 MCL1Q07820 350 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 GLRA4Q5JXX5 417 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 DCLRE1AQ6PJP8 1040 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 CD300LGQ6UXG3 332 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 CYP26C1Q6V0L0 522 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 HAUS6Q7Z4H7 955 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 LNX1Q8TBB1 728 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 RIN2Q8WYP3 895 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 LARP4BQ92615 738 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 ZBTB45Q96K62 511 aaPredicted RBP13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 ZMAT2Q96NC0 199 aaKnown RBP13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 ACAP3Q96P50 834 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 FIZ1Q96SL8 496 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 TCHPQ9BT92 498 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 TTPALQ9BTX7 342 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 PLEKHA4Q9H4M7 779 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 PARVGQ9HBI0 331 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 MAN1C1Q9NR34 630 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 CNTN3Q9P232 1028 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 STK17AQ9UEE5 414 aa13.63□□□□□ -0.23
CSNK1D-206ENST00000577578 TGM5O43548 720 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 B3GAT3O94766 335 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 WEE2P0C1S8 567 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 FGFR3P22607 806 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 MARCKSP29966 332 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 CLCNKBP51801 687 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 SOX4Q06945 474 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 MCM6Q14566 821 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 NOLC1Q14978 699 aaKnown RBP eCLIP13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 SLC39A14Q15043 492 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 PTPN21Q16825 1174 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 FAM171A1Q5VUB5 890 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 PDXDC1Q6P996 788 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 ELMSAN1Q6PJG2 1045 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 BMP8AQ7Z5Y6 402 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 ZBTB33Q86T24 672 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 ZDHHC14Q8IZN3 488 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 HASPINQ8TF76 798 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 DDX27Q96GQ7 796 aaKnown RBP13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 USP28Q96RU2 1077 aa13.62□□□□□ -0.23
CSNK1D-206ENST00000577578 HAPLN2Q9GZV7 340 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms