RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CAPSQ13938 189 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 MXD4Q14582 209 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 ST3GAL2Q16842 350 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 BMP2KLQ5H9B9 411 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 AXDND1Q5T1B0 1012 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 TANGO2Q6ICL3 276 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 NPAS3Q8IXF0 933 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 HACE1Q8IYU2 909 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 FBXL16Q8N461 479 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 PIK3R5Q8WYR1 880 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 ZSWIM4Q9H7M6 989 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 MRPS23Q9Y3D9 190 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 SF3B1O75533 1304 aaKnown RBP eCLIP11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 PATJQ8NI35 1801 aa11.23□□□□□ -0.61
NPLOC4-220ENST00000576940 NRG2O14511 850 aaPredicted RBP11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 CCNT1O60563 726 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 DTNBO60941 627 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 DEXIO95424 95 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 ADRB1P08588 477 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 HOXA9P31269 272 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 HSPA4P34932 840 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 MAGEA9P43362 315 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 EVCP57679 992 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 POU5F1BQ06416 359 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 ADCY1Q08828 1119 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 TUSC3Q13454 348 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 RAB33AQ14088 237 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 TFDP1Q14186 410 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 SLC5A9Q2M3M2 681 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 UVSSAQ2YD98 709 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 PABPC1LQ4VXU2 614 aaKnown RBP11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 SLC27A1Q6PCB7 646 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 ZNF852Q6ZMS4 543 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 MAEAQ7L5Y9 396 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 DAGLBQ8NCG7 672 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 CHAMP1Q96JM3 812 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 SNTG2Q9NY99 539 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 GMEB2Q9UKD1 530 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 USP20Q9Y2K6 914 aa11.22□□□□□ -0.61
NPLOC4-220ENST00000576940 CFAP47Q6ZTR5 3102 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 TTLL13PA6NNM8 815 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 PTGESO14684 152 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 ECI2O75521 394 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 RPS9P46781 194 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 SPIRE1Q08AE8 756 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 GRM2Q14416 872 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 NAB2Q15742 525 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 EARS2Q5JPH6 523 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 PPP4R3AQ6IN85 833 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 KRT25Q7Z3Z0 450 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 NEK8Q86SG6 692 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 POTEDQ86YR6 584 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 ZNF687Q8N1G0 1237 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 LMAN1LQ9HAT1 526 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 PRMT8Q9NR22 394 aaPredicted RBP11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 GJB4Q9NTQ9 266 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 KCNH3Q9ULD8 1083 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 NDRG2Q9UN36 371 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 CDY1Q9Y6F8 540 aa11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 MAP1BP46821 2468 aaKnown RBP11.21□□□□□ -0.61
NPLOC4-220ENST00000576940 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 CCDC194A0A1B0GVG4 234 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 CPLX1O14810 134 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 DGAT1O75907 488 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 THP07101 528 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 RHOP08100 348 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 TDGF1P13385 188 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 STK3Q13188 491 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 PPM1JQ5JR12 505 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 GALNT17Q6IS24 598 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 PRR23BQ6ZRT6 265 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 PIK3AP1Q6ZUJ8 805 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 OXER1Q8TDS5 423 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 PIGOQ8TEQ8 1089 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 HSD17B14Q9BPX1 270 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 EIF2AK1Q9BQI3 630 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 NFKBIZQ9BYH8 718 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 POLR3FQ9H1D9 316 aaPredicted RBP11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 GPRC5CQ9NQ84 441 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 RALYQ9UKM9 306 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 MRPS17Q9Y2R5 130 aaKnown RBP11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 CACNA1GO43497 2377 aa11.2□□□□□ -0.62
NPLOC4-220ENST00000576940 CHD8Q9HCK8 2581 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 I3L4J1 428 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 TBX3O15119 743 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 GDF9O60383 454 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 CDC45O75419 566 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 CEBPBP17676 345 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 PTPN2P17706 415 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 FGFR3P22607 806 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 PSMA5P28066 241 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 CD300LGQ6UXG3 332 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 NOSTRINQ8IVI9 506 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 CELF5Q8N6W0 485 aaKnown RBP11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 ELSPBP1Q96BH3 223 aa11.19□□□□□ -0.62
NPLOC4-220ENST00000576940 TCEAL4Q96EI5 215 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms