RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ATRIPQ8WXE1 791 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 HSD17B14Q9BPX1 270 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 PAAF1Q9BRP4 392 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 LARP6Q9BRS8 491 aaKnown RBP12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 TM6SF1Q9BZW5 370 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 POLR3FQ9H1D9 316 aaPredicted RBP12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 BRMS1Q9HCU9 246 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 CACNG4Q9UBN1 327 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 PCDHGA2Q9Y5H1 932 aa12.89□□□□□ -0.35
CTDNEP1-212ENST00000576613 CACNA1IQ9P0X4 2223 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 FAM170BA6NMN3 283 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 N4BP3O15049 544 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 NCAM2O15394 837 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 USO1O60763 962 aaKnown RBP12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 CALCRLQ16602 461 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 RSPO4Q2I0M5 234 aaPredicted RBP12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 UVSSAQ2YD98 709 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 PABPC1LQ4VXU2 614 aaKnown RBP12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 VARS2Q5ST30 1063 aaKnown RBP12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 ZBTB41Q5SVQ8 909 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 RTL10Q7L3V2 364 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 WASF1Q92558 559 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 NELL2Q99435 816 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 ADPGKQ9BRR6 497 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 TTC12Q9H892 705 aaPredicted RBP12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 KCNH3Q9ULD8 1083 aa12.88□□□□□ -0.35
CTDNEP1-212ENST00000576613 NCOR2Q9Y618 2525 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 XRCC6P12956 609 aaKnown RBP eCLIP12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 KRT2P35908 639 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 CSTF1Q05048 431 aaKnown RBP12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 SCRN1Q12765 414 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 RAB33AQ14088 237 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 FAM187BQ17R55 369 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 NPAS3Q8IXF0 933 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 MCPH1Q8NEM0 835 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 ITFG1Q8TB96 612 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 PIGOQ8TEQ8 1089 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 KXD1Q9BQD3 176 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 C2orf40Q9H1Z8 148 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 LTB4R2Q9NPC1 389 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 GJB4Q9NTQ9 266 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 DAXXQ9UER7 740 aaPredicted RBP12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 MRPS17Q9Y2R5 130 aaKnown RBP12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 DOCK6Q96HP0 2047 aa12.87□□□□□ -0.35
CTDNEP1-212ENST00000576613 COL4A3Q01955 1670 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 VWA8A3KMH1 1905 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 PTGESO14684 152 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 NEMFO60524 1076 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 RECQL4O94761 1208 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 OR1D2P34982 312 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 PRPF4BQ13523 1007 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 MAPK6Q16659 721 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 EARS2Q5JPH6 523 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 CDCA2Q69YH5 1023 aaPredicted RBP12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 TPRG1Q6ZUI0 275 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 MAEAQ7L5Y9 396 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 FZD8Q9H461 694 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 PDZD7Q9H5P4 517 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 ZSCAN32Q9NX65 697 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 SNTG2Q9NY99 539 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 GDE1Q9NZC3 331 aa12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 MRPS23Q9Y3D9 190 aaKnown RBP12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 MTF2Q9Y483 593 aaPredicted RBP12.86□□□□□ -0.35
CTDNEP1-212ENST00000576613 FAM205CA6NFA0 338 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 TMEM189-UBE2V1I3L0A0 370 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 ADAM12O43184 909 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 TRAPPC3O43617 180 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 ECI2O75521 394 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 ATP2B1P20020 1258 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 CD72P21854 359 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 TXKP42681 527 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 RPS9P46781 194 aaKnown RBP12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 LMNB2Q03252 620 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 NR5A1Q13285 461 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 ZNF852Q6ZMS4 543 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 ZBTB44Q8NCP5 570 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 ING5Q8WYH8 240 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 CLDN23Q96B33 292 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 FAM126AQ9BYI3 521 aaPredicted RBP12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 EPC1Q9H2F5 836 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 GPRC5CQ9NQ84 441 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 HCFC1R1Q9NWW0 138 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 ORC3Q9UBD5 711 aaPredicted RBP12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 MTRRQ9UBK8 725 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 CDV3Q9UKY7 258 aaKnown RBP12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 SMG5Q9UPR3 1016 aaKnown RBP12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 CDY1Q9Y6F8 540 aa12.85□□□□□ -0.35
CTDNEP1-212ENST00000576613 PRR5-ARHGAP8B1AHC4 643 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 PFKFB2O60825 505 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 B3GAT3O94766 335 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 PRKCBP05771 671 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 FGFR3P22607 806 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 TARSP26639 723 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 RBM25P49756 843 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 ARHGAP8P85298 464 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 PPP2R5DQ14738 602 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms