RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TTLL12Q14166 644 aaPredicted RBP13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 SPATA20Q8TB22 786 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 MKNK1Q9BUB5 465 aa13.89□□□□□ -0.19
PCDHGB3-201ENST00000576222 H3BRJ5 948 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 CASP7P55210 303 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 DLGAP5Q15398 846 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 TRIP10Q15642 601 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 CNGA3Q16281 694 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 CCNYQ8ND76 341 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 ATXN2LQ8WWM7 1075 aaKnown RBP13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 SLC7A3Q8WY07 619 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 BTBD6Q96KE9 485 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 ACAP3Q96P50 834 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 HSD3B7Q9H2F3 369 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 ABCF3Q9NUQ8 709 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 FIS1Q9Y3D6 152 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 PCDHGC5Q9Y5F6 944 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 ZCCHC18P0CG32 403 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 CNGA1P29973 690 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 CDC25CP30307 473 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 OR6B2Q6IFH4 312 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 SPOPLQ6IQ16 392 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 BZW1Q7L1Q6 419 aaKnown RBP13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 CCDC138Q96M89 665 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 MRPL46Q9H2W6 279 aaKnown RBP13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 TMEM94Q12767 1356 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 MROH2AA6NES4 1674 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 ESYT2A0FGR8 921 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 SESTD1Q86VW0 696 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 CENPTQ96BT3 561 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 TMEM117Q9H0C3 514 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 MANSC1Q9H8J5 431 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 HEY2Q9UBP5 337 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 MARCOQ9UEW3 520 aaPredicted RBP13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 MAD2L2Q9UI95 211 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 ATXN2Q99700 1313 aaKnown RBP13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 SLC37A4O43826 429 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 CYP11B2P19099 503 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 GNA15P30679 374 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 OVGP1Q12889 678 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 ERMARDQ5T6L9 678 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 TRIM72Q6ZMU5 477 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 PRPF31Q8WWY3 499 aaKnown RBP13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 PRCCQ92733 491 aaPredicted RBP13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 GFM2Q969S9 779 aaKnown RBP13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 FAM213AQ9BRX8 229 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 SIK3Q9Y2K2 1263 aa13.88□□□□□ -0.19
PCDHGB3-201ENST00000576222 ARHGEF28Q8N1W1 1705 aaKnown RBP13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 AKR1B1P15121 316 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 ABCD1P33897 745 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 ZC2HC1CQ53FD0 456 aaPredicted RBP13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 MIGA2Q7L4E1 593 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 RPS6KC1Q96S38 1066 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 KLHL11Q9NVR0 708 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 MROH1Q8NDA8 1641 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 TCP10L2B9ZVM9 353 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 SLC26A4O43511 780 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 KRT7P08729 469 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 MCF2P10911 925 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 EEF1DP29692 281 aaKnown RBP13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 GRAPQ13588 217 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 OLFML2BQ68BL8 750 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 C16orf87Q6PH81 154 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 SCARA5Q6ZMJ2 495 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 HAUS6Q7Z4H7 955 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 GRAPLQ8TC17 118 aaPredicted RBP13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 KAT2BQ92831 832 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 NRBF2Q96F24 287 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 ANKRD36BP1Q96IX9 119 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 VPS11Q9H270 941 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 WHRNQ9P202 907 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 SLC9A2Q9UBY0 812 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 PCSK1NQ9UHG2 260 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 MCM8Q9UJA3 840 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 RIPK2O43353 540 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 LXNQ9BS40 222 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 TRPV6Q9H1D0 765 aa13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 DDX56Q9NY93 547 aaKnown RBP13.87□□□□□ -0.19
PCDHGB3-201ENST00000576222 KRT3P12035 628 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 RASA1P20936 1047 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 PTPN4P29074 926 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 ZCWPW2Q504Y3 356 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 RSBN1LQ6PCB5 846 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 HDAC11Q96DB2 347 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 DENND3A2RUS2 1198 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 K7ERI5 159 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 CYLC2Q14093 348 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 C3orf62Q6ZUJ4 267 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 RCOR2Q8IZ40 523 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 NGRNQ9NPE2 291 aaKnown RBP13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 MTMR4Q9NYA4 1195 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 AFG3L2Q9Y4W6 797 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 HEY1Q9Y5J3 304 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 TCRBV5S4A2TA0A5A2 114 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 AGPSO00116 658 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 FOXN3O00409 490 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 SNX3O60493 162 aa13.86□□□□□ -0.19
PCDHGB3-201ENST00000576222 HSPA8P11142 646 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms