RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 SLC10A6Q3KNW5 377 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 ZCWPW2Q504Y3 356 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 XKR4Q5GH76 650 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 PPP2R2DQ66LE6 453 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 CRELD2Q6UXH1 353 aaPredicted RBP15.21■□□□□ 0.03
RPAIN-217ENST00000575711 ALKAL1Q6UXT8 129 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 SLC9A9Q8IVB4 645 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 CD302Q8IX05 232 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 GSTCDQ8NEC7 633 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 TMEM174Q8WUU8 243 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 NELFBQ8WX92 580 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 FAM212AQ96EL1 285 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 FAM193BQ96PV7 902 aaPredicted RBP15.21■□□□□ 0.03
RPAIN-217ENST00000575711 RBAKQ9NYW8 714 aaPredicted RBP15.21■□□□□ 0.03
RPAIN-217ENST00000575711 CNTN3Q9P232 1028 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 CTNND2Q9UQB3 1225 aa15.21■□□□□ 0.03
RPAIN-217ENST00000575711 MRPL42Q9Y6G3 142 aaKnown RBP15.21■□□□□ 0.03
RPAIN-217ENST00000575711 TTC26A0AVF1 554 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 LINC01553A4QN01 128 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 TULP1O00294 542 aaPredicted RBP15.2■□□□□ 0.02
RPAIN-217ENST00000575711 PTGESO14684 152 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 LETM1O95202 739 aaPredicted RBP15.2■□□□□ 0.02
RPAIN-217ENST00000575711 IL18RAPO95256 599 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 NR2F2P24468 414 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 SNRNP35Q16560 246 aaKnown RBP15.2■□□□□ 0.02
RPAIN-217ENST00000575711 DPCR1Q3MIW9 517 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 HABP4Q5JVS0 413 aaKnown RBP15.2■□□□□ 0.02
RPAIN-217ENST00000575711 GLRA4Q5JXX5 417 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 CEP135Q66GS9 1140 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 ANKRD40Q6AI12 368 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 LRRC55Q6ZSA7 311 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 BRSK2Q8IWQ3 736 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 RDH13Q8NBN7 331 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 ZSWIM2Q8NEG5 633 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 FBXL18Q96ME1 805 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 AAASQ9NRG9 546 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 DMAC2Q9NW81 257 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 MIOSQ9NXC5 875 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 FRMD4BQ9Y2L6 1034 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 RWDD3Q9Y3V2 267 aa15.2■□□□□ 0.02
RPAIN-217ENST00000575711 SMIM28A0A1B0GU29 152 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 TRIM49BA6NDI0 452 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 LACTBL1A8MY62 500 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 MEFVO15553 781 aaPredicted RBP15.19■□□□□ 0.02
RPAIN-217ENST00000575711 ZC3H11AO75152 810 aaKnown RBP eCLIP15.19■□□□□ 0.02
RPAIN-217ENST00000575711 ADRB2P07550 413 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 KCNE1P15382 129 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 LAG3P18627 525 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 PMS1P54277 932 aaKnown RBP15.19■□□□□ 0.02
RPAIN-217ENST00000575711 TAP1Q03518 808 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 ADAM9Q13443 819 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 CBWD2Q8IUF1 395 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 CLP1Q92989 425 aaKnown RBP15.19■□□□□ 0.02
RPAIN-217ENST00000575711 KIF12Q96FN5 646 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 SAMD11Q96NU1 681 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 TGS1Q96RS0 853 aaKnown RBP15.19■□□□□ 0.02
RPAIN-217ENST00000575711 TSPAN18Q96SJ8 248 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 CXCL16Q9H2A7 254 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 ASB7Q9H672 318 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 CWH43Q9H720 699 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 NRDE2Q9H7Z3 1164 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 SLC38A7Q9NVC3 462 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 ANO10Q9NW15 660 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 HCSTQ9UBK5 93 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 PLAGL2Q9UPG8 496 aa15.19■□□□□ 0.02
RPAIN-217ENST00000575711 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.19■□□□□ 0.02
RPAIN-217ENST00000575711 TMEM265A0A087WTH1 108 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 CARNS1A5YM72 827 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 SOX1O00570 391 aaPredicted RBP15.18■□□□□ 0.02
RPAIN-217ENST00000575711 CETN3O15182 167 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 XPOTO43592 962 aaKnown RBP15.18■□□□□ 0.02
RPAIN-217ENST00000575711 ARHGEF15O94989 841 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 STX17P56962 302 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 FKBP3Q00688 224 aaKnown RBP15.18■□□□□ 0.02
RPAIN-217ENST00000575711 TUSC3Q13454 348 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 SURF1Q15526 300 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 STX1AQ16623 288 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 FOXR2Q6PJQ5 311 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 ZNF280BQ86YH2 543 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 ZMAT2Q96NC0 199 aaKnown RBP15.18■□□□□ 0.02
RPAIN-217ENST00000575711 PPP1R10Q96QC0 940 aaKnown RBP15.18■□□□□ 0.02
RPAIN-217ENST00000575711 TMEM175Q9BSA9 504 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 RWDD2AQ9UIY3 292 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 DERAQ9Y315 318 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 PCDHB12Q9Y5F1 795 aa15.18■□□□□ 0.02
RPAIN-217ENST00000575711 FNDC1Q4ZHG4 1894 aaPredicted RBP15.17■□□□□ 0.02
RPAIN-217ENST00000575711 DDHD2O94830 711 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 ALDH2P05091 517 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 LINC00271P0C7V0 271 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 CTNNB1P35222 781 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 ALDH7A1P49419 539 aaKnown RBP15.17■□□□□ 0.02
RPAIN-217ENST00000575711 BCAR1P56945 870 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 ERVK-21P61565 698 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 SPAG1Q07617 926 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 CYP24A1Q07973 514 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 DSC1Q08554 894 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 TMEM132DQ14C87 1099 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 CT47A1Q5JQC4 288 aaPredicted RBP15.17■□□□□ 0.02
RPAIN-217ENST00000575711 JADE1Q6IE81 842 aa15.17■□□□□ 0.02
RPAIN-217ENST00000575711 TTI2Q6NXR4 508 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms