RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 SYCP3Q8IZU3 236 aa18.21■□□□□ 0.51
TMEM88-202ENST00000574668 RNF169Q8NCN4 708 aa18.21■□□□□ 0.51
TMEM88-202ENST00000574668 PBXIP1Q96AQ6 731 aa18.21■□□□□ 0.51
TMEM88-202ENST00000574668 ACO2Q99798 780 aaKnown RBP18.21■□□□□ 0.51
TMEM88-202ENST00000574668 TCHPQ9BT92 498 aa18.21■□□□□ 0.51
TMEM88-202ENST00000574668 APOL5Q9BWW9 433 aa18.21■□□□□ 0.51
TMEM88-202ENST00000574668 PHF7Q9BWX1 381 aaPredicted RBP18.21■□□□□ 0.51
TMEM88-202ENST00000574668 PDZD7Q9H5P4 517 aa18.21■□□□□ 0.51
TMEM88-202ENST00000574668 FAM105AQ9NUU6 356 aa18.21■□□□□ 0.51
TMEM88-202ENST00000574668 RMND1Q9NWS8 449 aa18.21■□□□□ 0.51
TMEM88-202ENST00000574668 TNFSF13BQ9Y275 285 aa18.21■□□□□ 0.51
TMEM88-202ENST00000574668 PIEZO1Q92508 2521 aa18.21■□□□□ 0.51
TMEM88-202ENST00000574668 ZNF318Q5VUA4 2279 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 A0A0U1RQF3 1178 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 PRPF6O94906 941 aaKnown RBP18.2■□□□□ 0.5
TMEM88-202ENST00000574668 EDN1P05305 212 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 PTMSP20962 102 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 FAM189BP81408 668 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 EHHADHQ08426 723 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 KCNB1Q14721 858 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 CAMK4Q16566 473 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 ZPBP2Q6X784 338 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 LRRC55Q6ZSA7 311 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 ECHDC2Q86YB7 292 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 MAP4K3Q8IVH8 894 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 HACE1Q8IYU2 909 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 SUSD6Q92537 303 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 ERCC4Q92889 916 aaPredicted RBP18.2■□□□□ 0.5
TMEM88-202ENST00000574668 PGBD4Q96DM1 585 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 CLSTN2Q9H4D0 955 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 TMEM206Q9H813 350 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 RNF19AQ9NV58 838 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 TMEM161AQ9NX61 479 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 PCDHB2Q9Y5E7 798 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 PCDHA5Q9Y5H7 936 aa18.2■□□□□ 0.5
TMEM88-202ENST00000574668 TTLL13PA6NNM8 815 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 HNRNPDLO14979 420 aaKnown RBP18.19■□□□□ 0.5
TMEM88-202ENST00000574668 EIF3DO15371 548 aaKnown RBP eCLIP18.19■□□□□ 0.5
TMEM88-202ENST00000574668 PPP1R37O75864 691 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 RHOBTB3O94955 611 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 CASP5P51878 434 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 DCAF4L1Q3SXM0 396 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 ZNF568Q3ZCX4 644 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 UBXN11Q5T124 520 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 EEF1DP3Q658K8 133 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 LLGL2Q6P1M3 1020 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 BMP8AQ7Z5Y6 402 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 GPT2Q8TD30 523 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 CASD1Q96PB1 797 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 GSDMAQ96QA5 445 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 TRAIPQ9BWF2 469 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 STRA6Q9BX79 667 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 EIF2AQ9BY44 585 aaKnown RBP18.19■□□□□ 0.5
TMEM88-202ENST00000574668 FGFBP2Q9BYJ0 223 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 NUP62CLQ9H1M0 184 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 ELAC1Q9H777 363 aaKnown RBP18.19■□□□□ 0.5
TMEM88-202ENST00000574668 ANKFY1Q9P2R3 1169 aa18.19■□□□□ 0.5
TMEM88-202ENST00000574668 HIDE1A8MVS5 230 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 ZNF623O75123 536 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 TOM1L1O75674 476 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 KIF20AO95235 890 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 EOMESO95936 686 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 HARSP12081 509 aaKnown RBP18.18■□□□□ 0.5
TMEM88-202ENST00000574668 ITGA4P13612 1032 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 LAG3P18627 525 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 SP100P23497 879 aaPredicted RBP18.18■□□□□ 0.5
TMEM88-202ENST00000574668 STK4Q13043 487 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 KCNC3Q14003 757 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 MPZL3Q6UWV2 235 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 ZBTB33Q86T24 672 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 CDCA3Q99618 268 aaPredicted RBP18.18■□□□□ 0.5
TMEM88-202ENST00000574668 TCF25Q9BQ70 676 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 APOL6Q9BWW8 343 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 GTPBP4Q9BZE4 634 aaKnown RBP18.18■□□□□ 0.5
TMEM88-202ENST00000574668 S1PR5Q9H228 398 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 CDH22Q9UJ99 828 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 UBE4BO95155 1302 aa18.18■□□□□ 0.5
TMEM88-202ENST00000574668 CLDN3O15551 220 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 HOXA2O43364 376 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 PIGRP01833 764 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 ATF7P17544 494 aaPredicted RBP18.17■□□□□ 0.5
TMEM88-202ENST00000574668 SLFN12LQ6IEE8 588 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 ANKRD54Q6NXT1 300 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 SYCE2Q6PIF2 218 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 NELFCDQ8IXH7 590 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 GLIS3Q8NEA6 775 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 ZNF507Q8TCN5 953 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 ZBTB45Q96K62 511 aaPredicted RBP18.17■□□□□ 0.5
TMEM88-202ENST00000574668 TMEM117Q9H0C3 514 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 ENTPD7Q9NQZ7 604 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 PARP2Q9UGN5 583 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 IPPQ9Y573 584 aa18.17■□□□□ 0.5
TMEM88-202ENST00000574668 MCF2P10911 925 aa18.16■□□□□ 0.5
TMEM88-202ENST00000574668 PLCB3Q01970 1234 aa18.16■□□□□ 0.5
TMEM88-202ENST00000574668 SIGLEC14Q08ET2 396 aa18.16■□□□□ 0.5
TMEM88-202ENST00000574668 KCNA1Q09470 495 aa18.16■□□□□ 0.5
TMEM88-202ENST00000574668 NOLC1Q14978 699 aaKnown RBP eCLIP18.16■□□□□ 0.5
TMEM88-202ENST00000574668 PDE12Q6L8Q7 609 aaKnown RBP18.16■□□□□ 0.5
TMEM88-202ENST00000574668 KCNT2Q6UVM3 1135 aa18.16■□□□□ 0.5
TMEM88-202ENST00000574668 TMEM184AQ6ZMB5 413 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms