RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 TSG101Q99816 390 aa17.1■□□□□ 0.33
CCNE1-204ENST00000574121 FAM213AQ9BRX8 229 aa17.1■□□□□ 0.33
CCNE1-204ENST00000574121 PLVAPQ9BX97 442 aa17.1■□□□□ 0.33
CCNE1-204ENST00000574121 SEMA6BQ9H3T3 888 aa17.1■□□□□ 0.33
CCNE1-204ENST00000574121 SLC38A7Q9NVC3 462 aa17.1■□□□□ 0.33
CCNE1-204ENST00000574121 KLK14Q9P0G3 267 aa17.1■□□□□ 0.33
CCNE1-204ENST00000574121 TMEM63CQ9P1W3 806 aa17.1■□□□□ 0.33
CCNE1-204ENST00000574121 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
CCNE1-204ENST00000574121 BICDL2A1A5D9 508 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 ZNF233A6NK53 670 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 PPP1R3GB7ZBB8 358 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 SOX1O00570 391 aaPredicted RBP17.09■□□□□ 0.33
CCNE1-204ENST00000574121 CLIC2O15247 247 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 IL18RAPO95256 599 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 NR3C1P04150 777 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 LINC00271P0C7V0 271 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 CCNE1P24864 410 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 CYP2J2P51589 502 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 AFF1P51825 1210 aaKnown RBP17.09■□□□□ 0.33
CCNE1-204ENST00000574121 ERVK-21P61565 698 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 DSC1Q08554 894 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 CT47A1Q5JQC4 288 aaPredicted RBP17.09■□□□□ 0.33
CCNE1-204ENST00000574121 CAVIN1Q6NZI2 390 aaKnown RBP17.09■□□□□ 0.33
CCNE1-204ENST00000574121 LRRC55Q6ZSA7 311 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 NT5DC4Q86YG4 428 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 P2RX5Q93086 422 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 SAAL1Q96ER3 474 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 FAM193BQ96PV7 902 aaPredicted RBP17.09■□□□□ 0.33
CCNE1-204ENST00000574121 PPP1R10Q96QC0 940 aaKnown RBP17.09■□□□□ 0.33
CCNE1-204ENST00000574121 TMEM175Q9BSA9 504 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 CWH43Q9H720 699 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 DACH1Q9UI36 760 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 DERAQ9Y315 318 aa17.09■□□□□ 0.33
CCNE1-204ENST00000574121 SMIM28A0A1B0GU29 152 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 C5orf67F2Z3F1 127 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 MAPK13O15264 365 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 MEFVO15553 781 aaPredicted RBP17.08■□□□□ 0.32
CCNE1-204ENST00000574121 EXOC3O60645 756 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 LETM1O95202 739 aaPredicted RBP17.08■□□□□ 0.32
CCNE1-204ENST00000574121 POMCP01189 267 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 RB1P06400 928 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
CCNE1-204ENST00000574121 NR2F2P24468 414 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 ALDH7A1P49419 539 aaKnown RBP17.08■□□□□ 0.32
CCNE1-204ENST00000574121 NLRP12P59046 1061 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 SURF1Q15526 300 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 SNRNP35Q16560 246 aaKnown RBP17.08■□□□□ 0.32
CCNE1-204ENST00000574121 MIOSQ9NXC5 875 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 RBAKQ9NYW8 714 aaPredicted RBP17.08■□□□□ 0.32
CCNE1-204ENST00000574121 C2CD2Q9Y426 696 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 PCDHB12Q9Y5F1 795 aa17.08■□□□□ 0.32
CCNE1-204ENST00000574121 FNDC1Q4ZHG4 1894 aaPredicted RBP17.07■□□□□ 0.32
CCNE1-204ENST00000574121 GOLGA8IPA6NC78 632 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 GOLGA8JA6NMD2 632 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 XPOTO43592 962 aaKnown RBP17.07■□□□□ 0.32
CCNE1-204ENST00000574121 PPM1AP35813 382 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 BMPR1AP36894 532 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 FKBP3Q00688 224 aaKnown RBP17.07■□□□□ 0.32
CCNE1-204ENST00000574121 PAK1Q13153 545 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 TUSC3Q13454 348 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 NFKBIBQ15653 356 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 NAB2Q15742 525 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
CCNE1-204ENST00000574121 SASS6Q6UVJ0 657 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 CBWD2Q8IUF1 395 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 COLGALT2Q8IYK4 626 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 UROC1Q96N76 676 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 ZMAT2Q96NC0 199 aaKnown RBP17.07■□□□□ 0.32
CCNE1-204ENST00000574121 ZNF558Q96NG5 402 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 MKNK1Q9BUB5 465 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 ZNF576Q9H609 170 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 NRDE2Q9H7Z3 1164 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 PLAGL2Q9UPG8 496 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 FRMD4BQ9Y2L6 1034 aa17.07■□□□□ 0.32
CCNE1-204ENST00000574121 LACTBL1A8MY62 500 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 ZC3H11AO75152 810 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCNE1-204ENST00000574121 DDHD2O94830 711 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 ARHGEF15O94989 841 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 CYP3A5P20815 502 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 ENPEPQ07075 957 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 ADAM9Q13443 819 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 ZBTB6Q15916 424 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 GLRA4Q5JXX5 417 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 ZNF697Q5TEC3 545 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 ANKRD40Q6AI12 368 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 KLHL10Q6JEL2 608 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 TTI2Q6NXR4 508 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 KCNT2Q6UVM3 1135 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 ZNF280BQ86YH2 543 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 ZC3H3Q8IXZ2 948 aaKnown RBP17.06■□□□□ 0.32
CCNE1-204ENST00000574121 COLGALT1Q8NBJ5 622 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 ZSWIM2Q8NEG5 633 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 NELFBQ8WX92 580 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 DDX27Q96GQ7 796 aaKnown RBP17.06■□□□□ 0.32
CCNE1-204ENST00000574121 LRCH3Q96II8 777 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 C11orf84Q9BUA3 381 aaPredicted RBP17.06■□□□□ 0.32
CCNE1-204ENST00000574121 RWDD2AQ9UIY3 292 aa17.06■□□□□ 0.32
CCNE1-204ENST00000574121 UBQLN1Q9UMX0 589 aaKnown RBP17.06■□□□□ 0.32
CCNE1-204ENST00000574121 CETN3O15182 167 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms