RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 RUBCNQ92622 972 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 NMD3Q96D46 503 aaKnown RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 ZBTB10Q96DT7 871 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 CYFIP2Q96F07 1278 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 DDX11Q96FC9 970 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 PEX11GQ96HA9 241 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 TMX3Q96JJ7 454 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 MAELQ96JY0 434 aaKnown RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 SNX22Q96L94 193 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 MRGPRX4Q96LA9 322 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 MRGPRX1Q96LB2 322 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 P2RX7Q99572 595 aaKnown RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 FDXACB1Q9BRP7 624 aaPredicted RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 CNPPD1Q9BV87 410 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 EIF2AQ9BY44 585 aaKnown RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 CARS2Q9HA77 564 aaKnown RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 PLEKHA5Q9HAU0 1116 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 UBN1Q9NPG3 1134 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 RIC8AQ9NPQ8 531 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 WASH6PQ9NQA3 447 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.44□□□□□ -2.02
CHD3-217ENST00000574022 IRAK4Q9NWZ3 460 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 STK32BQ9NY57 414 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 GGA3Q9NZ52 723 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 LMCD1Q9NZU5 365 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 SLAMF8Q9P0V8 285 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 KIF17Q9P2E2 1029 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 FEZ2Q9UHY8 353 aaPredicted RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 DBR1Q9UK59 544 aaKnown RBP2.44□□□□□ -2.02
CHD3-217ENST00000574022 ITGB1BP2Q9UKP3 347 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 SIK3Q9Y2K2 1263 aa2.44□□□□□ -2.02
CHD3-217ENST00000574022 A0A0A6YYK5 440 aaPredicted RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 ZC3H12DA2A288 527 aaKnown RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 ANKRD18BA2A2Z9 1011 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 ZNF839A8K0R7 811 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 B4E171 279 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 TISP43B9A030 160 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 B9A039 149 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 F8W031 263 aaPredicted RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 IPO5O00410 1097 aaKnown RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 BTN3A1O00481 513 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 ORC4O43929 436 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 PRAMEF4O60810 478 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 GFPT2O94808 682 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 SEC24DO94855 1032 aaPredicted RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 DDX58O95786 925 aaKnown RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 LRG1P02750 347 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 LTA4HP09960 611 aaKnown RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 ATP1A3P13637 1013 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 DDCP20711 480 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 PRDX5P30044 214 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 ECHS1P30084 290 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 ARL4AP40617 200 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 TSPAN7P41732 249 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 STAT5AP42229 794 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 SLC6A9P48067 706 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 KCNJ5P48544 419 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 FLT3LGP49771 235 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 TUBP50607 506 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 SESN2P58004 480 aaPredicted RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 RPS16P62249 146 aaKnown RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 TLE1Q04724 770 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 PRKCQQ04759 706 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 CD69Q07108 199 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 NFIAQ12857 509 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 IKZF1Q13422 519 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 UBE3CQ15386 1083 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 CPSF6Q16630 551 aaKnown RBP eCLIP2.43□□□□□ -2.02
CHD3-217ENST00000574022 MAN2A1Q16706 1144 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 DGKDQ16760 1214 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 FAM110CQ1W6H9 321 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 ADCK5Q3MIX3 580 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 SLC44A4Q53GD3 710 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 C19orf54Q5BKX5 351 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 RALGPS1Q5JS13 557 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 AGAP9Q5VTM2 703 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 CCDC30Q5VVM6 783 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 SPATA1Q5VX52 437 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 RRAGBQ5VZM2 374 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 ZNF787Q6DD87 383 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 ITPRIPL1Q6GPH6 555 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 BORAQ6PGQ7 559 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 PAQR3Q6TCH7 311 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 TEPPQ6URK8 271 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 ABHD15Q6UXT9 468 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 ZNF783Q6ZMS7 281 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 CATSPERGQ6ZRH7 1159 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 PRR23CQ6ZRP0 262 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 Q6ZVL8 140 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 UNC13DQ70J99 1090 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 HEATR4Q86WZ0 1026 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 FTSJ3Q8IY81 847 aaKnown RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 PQLC1Q8N2U9 271 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 SDR16C5Q8N3Y7 309 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 CELF5Q8N6W0 485 aaKnown RBP2.43□□□□□ -2.02
CHD3-217ENST00000574022 FANCBQ8NB91 859 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 CCDC150Q8NCX0 1101 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 CYP2W1Q8TAV3 490 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 SHKBP1Q8TBC3 707 aa2.43□□□□□ -2.02
CHD3-217ENST00000574022 IFI44Q8TCB0 444 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms