RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 VPS9D1Q9Y2B5 631 aa9.97□□□□□ -0.81
NDE1-207ENST00000573203 GDAQ9Y2T3 454 aa9.97□□□□□ -0.81
NDE1-207ENST00000573203 TRIP11Q15643 1979 aa9.97□□□□□ -0.81
NDE1-207ENST00000573203 C5orf42Q9H799 3197 aa9.97□□□□□ -0.81
NDE1-207ENST00000573203 NPHP3-ACAD11A0A0J9YXS1 232 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 CLASP2O75122 1294 aaKnown RBP9.96□□□□□ -0.82
NDE1-207ENST00000573203 RECQL4O94761 1208 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 TXLNAP40222 546 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 STRN3Q13033 797 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 COASYQ13057 564 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 MCM6Q14566 821 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 SMAD2Q15796 467 aaKnown RBP9.96□□□□□ -0.82
NDE1-207ENST00000573203 ZNF568Q3ZCX4 644 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 ARSHQ5FYA8 562 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 SPECC1Q5M775 1068 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 GJD3Q8N144 294 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 SMRP1Q8NCR6 262 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 GSTCDQ8NEC7 633 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 VN1R2Q8NFZ6 395 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 SPIRE2Q8WWL2 714 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 ACO2Q99798 780 aaKnown RBP9.96□□□□□ -0.82
NDE1-207ENST00000573203 TCHPQ9BT92 498 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 TARS2Q9BW92 718 aaKnown RBP9.96□□□□□ -0.82
NDE1-207ENST00000573203 COLEC11Q9BWP8 271 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 VN1R3Q9BXE9 311 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 CCSER1Q9C0I3 900 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 LARSQ9P2J5 1176 aaKnown RBP9.96□□□□□ -0.82
NDE1-207ENST00000573203 CCDC39Q9UFE4 941 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 PRKAG3Q9UGI9 489 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 ODF2LQ9ULJ1 636 aa9.96□□□□□ -0.82
NDE1-207ENST00000573203 SRPRBQ9Y5M8 271 aaKnown RBP9.96□□□□□ -0.82
NDE1-207ENST00000573203 H0YCG3 227 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 C2CD2LO14523 706 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 FAM13AO94988 1023 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 SOD2P04179 222 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 KRT18P05783 430 aaKnown RBP9.95□□□□□ -0.82
NDE1-207ENST00000573203 URODP06132 367 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 THP07101 528 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 ZNF445P59923 1031 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 UBE2HP62256 183 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 KRT85P78386 507 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 ZP2Q05996 745 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 TUSC3Q13454 348 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 KCNC3Q14003 757 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 PTPN14Q15678 1187 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 L1TD1Q5T7N2 865 aaKnown RBP9.95□□□□□ -0.82
NDE1-207ENST00000573203 FOXD4L5Q5VV16 416 aaPredicted RBP9.95□□□□□ -0.82
NDE1-207ENST00000573203 ANKRD54Q6NXT1 300 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 TMEM184AQ6ZMB5 413 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 TAS1R3Q7RTX0 852 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 ZBTB33Q86T24 672 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 ADHFE1Q8IWW8 467 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 TMEM161BQ8NDZ6 487 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 LRRC15Q8TF66 581 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 FOXD4L4Q8WXT5 416 aaPredicted RBP9.95□□□□□ -0.82
NDE1-207ENST00000573203 LARP4BQ92615 738 aaKnown RBP9.95□□□□□ -0.82
NDE1-207ENST00000573203 RAD54LQ92698 747 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 CASP10Q92851 521 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 EPSTI1Q96J88 318 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 CLIC6Q96NY7 704 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 USP28Q96RU2 1077 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 POP1Q99575 1024 aaKnown RBP9.95□□□□□ -0.82
NDE1-207ENST00000573203 REEP2Q9BRK0 252 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 NTPCRQ9BSD7 190 aaKnown RBP9.95□□□□□ -0.82
NDE1-207ENST00000573203 HERC2P3Q9BVR0 1158 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 APOL5Q9BWW9 433 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 EMILIN2Q9BXX0 1053 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 CD320Q9NPF0 282 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 MRPL17Q9NRX2 175 aaKnown RBP9.95□□□□□ -0.82
NDE1-207ENST00000573203 BLOC1S4Q9NUP1 217 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 MARCH5Q9NX47 278 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 FBXO2Q9UK22 296 aaPredicted RBP9.95□□□□□ -0.82
NDE1-207ENST00000573203 CFAP45Q9UL16 551 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 USP15Q9Y4E8 981 aaPredicted RBP9.95□□□□□ -0.82
NDE1-207ENST00000573203 HCFC2Q9Y5Z7 792 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 IRAK3Q9Y616 596 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 CITO14578 2027 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 MUC3AQ02505 3323 aa9.95□□□□□ -0.82
NDE1-207ENST00000573203 CASTOR2A6NHX0 329 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 F8W810 466 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 PTGESO14684 152 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 TBCAO75347 108 aaKnown RBP9.94□□□□□ -0.82
NDE1-207ENST00000573203 TADA2AO75478 443 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 LETM1O95202 739 aaPredicted RBP9.94□□□□□ -0.82
NDE1-207ENST00000573203 MAPTP10636 758 aaKnown RBP9.94□□□□□ -0.82
NDE1-207ENST00000573203 MCF2P10911 925 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 HARSP12081 509 aaKnown RBP9.94□□□□□ -0.82
NDE1-207ENST00000573203 HOXB8P17481 243 aaPredicted RBP9.94□□□□□ -0.82
NDE1-207ENST00000573203 KLRC2P26717 231 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 GRM5P41594 1212 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 MATR3P43243 847 aaKnown RBP eCLIP9.94□□□□□ -0.821e-9■■■■■ 34.8
NDE1-207ENST00000573203 GLUD2P49448 558 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 YARSP54577 528 aaKnown RBP9.94□□□□□ -0.82
NDE1-207ENST00000573203 NCKAP1LP55160 1127 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 OSTNP61366 133 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 SLC39A14Q15043 492 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 STK38Q15208 465 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 TPRNQ4KMQ1 711 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 C6orf132Q5T0Z8 1188 aa9.94□□□□□ -0.82
NDE1-207ENST00000573203 RRAGBQ5VZM2 374 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms