RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SFXN1Q9H9B4 322 aa19.01■□□□□ 0.63
SMG6-212ENST00000573153 GOLGA2P5Q9HBQ8 144 aa19.01■□□□□ 0.63
SMG6-212ENST00000573153 SMIM28A0A1B0GU29 152 aa19■□□□□ 0.63
SMG6-212ENST00000573153 FAM189A1O60320 539 aa19■□□□□ 0.63
SMG6-212ENST00000573153 SP100P23497 879 aaPredicted RBP19■□□□□ 0.63
SMG6-212ENST00000573153 KLRC2P26717 231 aa19■□□□□ 0.63
SMG6-212ENST00000573153 ZXDAP98168 799 aa19■□□□□ 0.63
SMG6-212ENST00000573153 BMS1Q14692 1282 aaKnown RBP19■□□□□ 0.63
SMG6-212ENST00000573153 ZNF568Q3ZCX4 644 aa19■□□□□ 0.63
SMG6-212ENST00000573153 PRSS55Q6UWB4 352 aaPredicted RBP19■□□□□ 0.63
SMG6-212ENST00000573153 TMC5Q6UXY8 1006 aa19■□□□□ 0.63
SMG6-212ENST00000573153 HFE2Q6ZVN8 426 aa19■□□□□ 0.63
SMG6-212ENST00000573153 LNX1Q8TBB1 728 aaPredicted RBP19■□□□□ 0.63
SMG6-212ENST00000573153 ASIC4Q96FT7 647 aa19■□□□□ 0.63
SMG6-212ENST00000573153 NECTIN4Q96NY8 510 aa19■□□□□ 0.63
SMG6-212ENST00000573153 MRPL4Q9BYD3 311 aaKnown RBP19■□□□□ 0.63
SMG6-212ENST00000573153 CCSER1Q9C0I3 900 aa19■□□□□ 0.63
SMG6-212ENST00000573153 MAN1C1Q9NR34 630 aa19■□□□□ 0.63
SMG6-212ENST00000573153 FNIP2Q9P278 1114 aa19■□□□□ 0.63
SMG6-212ENST00000573153 RBM19Q9Y4C8 960 aaKnown RBP19■□□□□ 0.63
SMG6-212ENST00000573153 ADAM12O43184 909 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 N4BP1O75113 896 aaKnown RBP18.99■□□□□ 0.63
SMG6-212ENST00000573153 C1RP00736 705 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 MCF2P10911 925 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 RPL17P18621 184 aaKnown RBP18.99■□□□□ 0.63
SMG6-212ENST00000573153 MTHFRP42898 656 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 MCM6Q14566 821 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 PTPN21Q16825 1174 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 UPP1Q16831 310 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 USP41Q3LFD5 358 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 TMEM130Q8N3G9 435 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 PIK3R5Q8WYR1 880 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 RAD54LQ92698 747 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 EPSTI1Q96J88 318 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 CDK5RAP3Q96JB5 506 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 CLSTN3Q9BQT9 956 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 RHOBTB2Q9BYZ6 727 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 CNTN3Q9P232 1028 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 KCNG1Q9UIX4 513 aa18.99■□□□□ 0.63
SMG6-212ENST00000573153 MTCL1Q9Y4B5 1905 aaKnown RBP18.99■□□□□ 0.63
SMG6-212ENST00000573153 SF3B1O75533 1304 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMG6-212ENST00000573153 TGM5O43548 720 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 RFPL2O75678 378 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 ADH1AP07327 375 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 KCNE1P15382 129 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 UBA7P41226 1012 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 CLCNKBP51801 687 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 SPECC1Q5M775 1068 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 CES5AQ6NT32 575 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 MPZL3Q6UWV2 235 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 RSPO2Q6UXX9 243 aaPredicted RBP18.98■□□□□ 0.63
SMG6-212ENST00000573153 C15orf39Q6ZRI6 1047 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 GPBP1Q86WP2 473 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 RIN2Q8WYP3 895 aaPredicted RBP18.98■□□□□ 0.63
SMG6-212ENST00000573153 USP28Q96RU2 1077 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 ZSCAN16Q9H4T2 348 aaPredicted RBP18.98■□□□□ 0.63
SMG6-212ENST00000573153 ODF2LQ9ULJ1 636 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 SSX2IPQ9Y2D8 614 aa18.98■□□□□ 0.63
SMG6-212ENST00000573153 KMT2EQ8IZD2 1858 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 A0A087X0B3 334 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 STX6O43752 255 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 NR1I2O75469 434 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 TOM1L1O75674 476 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 GLUD1P00367 558 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 PIGRP01833 764 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 FGFR3P22607 806 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 MARCKSP29966 332 aaPredicted RBP18.97■□□□□ 0.63
SMG6-212ENST00000573153 MCL1Q07820 350 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 TMEM132AQ24JP5 1023 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 SLC10A6Q3KNW5 377 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 SEZ6Q53EL9 994 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 SLC39A4Q6P5W5 647 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 ZPBP2Q6X784 338 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 TRIM67Q6ZTA4 783 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 BMP8AQ7Z5Y6 402 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 ZBTB33Q86T24 672 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 CALML4Q96GE6 196 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 RIPOR3Q96MK2 946 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 CLIC6Q96NY7 704 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 SMOC2Q9H3U7 446 aa18.97■□□□□ 0.63
SMG6-212ENST00000573153 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMG6-212ENST00000573153 ARIH1Q9Y4X5 557 aaPredicted RBP18.97■□□□□ 0.63
SMG6-212ENST00000573153 CITO14578 2027 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 TADA2AO75478 443 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 SPATA31D3P0C874 917 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 MYBP10242 640 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 PDIA4P13667 645 aaKnown RBP18.96■□□□□ 0.63
SMG6-212ENST00000573153 OSTNP61366 133 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 ATAT1Q5SQI0 421 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 FAM171A1Q5VUB5 890 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 SPATA31D4Q6ZUB0 917 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 HAUS6Q7Z4H7 955 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 APBB1IPQ7Z5R6 666 aaPredicted RBP18.96■□□□□ 0.63
SMG6-212ENST00000573153 ZDHHC14Q8IZN3 488 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 HDAC7Q8WUI4 952 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 FOXD4L1Q9NU39 408 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 FBXW11Q9UKB1 542 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 USTQ9Y2C2 406 aa18.96■□□□□ 0.63
SMG6-212ENST00000573153 SRPRBQ9Y5M8 271 aaKnown RBP18.96■□□□□ 0.63
SMG6-212ENST00000573153 DOCK8Q8NF50 2099 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms