RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 CLSTN3Q9BQT9 956 aa15.84■□□□□ 0.13
CIITA-205ENST00000571186 TTPALQ9BTX7 342 aa15.84■□□□□ 0.13
CIITA-205ENST00000571186 NFKBIZQ9BYH8 718 aa15.84■□□□□ 0.13
CIITA-205ENST00000571186 POLR3FQ9H1D9 316 aaPredicted RBP15.84■□□□□ 0.13
CIITA-205ENST00000571186 CDH7Q9ULB5 785 aa15.84■□□□□ 0.13
CIITA-205ENST00000571186 SF3B1O75533 1304 aaKnown RBP eCLIP15.84■□□□□ 0.13
CIITA-205ENST00000571186 CASTOR2A6NHX0 329 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 LRRIQ4A6NIV6 560 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 CCL16O15467 120 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 LYPLA2O95372 231 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 GLULP15104 373 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 TUSC3Q13454 348 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 PSMD5Q16401 504 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 CALCRLQ16602 461 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 DCLK2Q8N568 766 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 FAM184AQ8NB25 1140 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 RUBCNQ92622 972 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 C8orf76Q96K31 380 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 TTC12Q9H892 705 aaPredicted RBP15.83■□□□□ 0.12
CIITA-205ENST00000571186 BRMS1Q9HCU9 246 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 FBXW11Q9UKB1 542 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 SPTBN2O15020 2390 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 GPR179Q6PRD1 2367 aa15.83■□□□□ 0.12
CIITA-205ENST00000571186 POTEMA6NI47 508 aa15.82■□□□□ 0.12
CIITA-205ENST00000571186 USO1O60763 962 aaKnown RBP15.82■□□□□ 0.12
CIITA-205ENST00000571186 THP07101 528 aa15.82■□□□□ 0.12
CIITA-205ENST00000571186 C8AP07357 584 aa15.82■□□□□ 0.12
CIITA-205ENST00000571186 HNRNPA1P09651 372 aaKnown RBP eCLIP15.82■□□□□ 0.12
CIITA-205ENST00000571186 TXKP42681 527 aa15.82■□□□□ 0.12
CIITA-205ENST00000571186 RARRES1P49788 294 aa15.82■□□□□ 0.12
CIITA-205ENST00000571186 HMGN5P82970 282 aaKnown RBP15.82■□□□□ 0.12
CIITA-205ENST00000571186 TMEM132AQ24JP5 1023 aa15.82■□□□□ 0.12
CIITA-205ENST00000571186 MTSS1LQ765P7 747 aa15.82■□□□□ 0.12
CIITA-205ENST00000571186 LNX1Q8TBB1 728 aaPredicted RBP15.82■□□□□ 0.12
CIITA-205ENST00000571186 PIK3R5Q8WYR1 880 aa15.82■□□□□ 0.12
CIITA-205ENST00000571186 FGF13Q92913 245 aa15.82■□□□□ 0.12
CIITA-205ENST00000571186 SPATA6Q9NWH7 488 aaPredicted RBP15.82■□□□□ 0.12
CIITA-205ENST00000571186 DNAH14Q0VDD8 3507 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 KANSL1LA0AUZ9 987 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 MED19A0JLT2 244 aaPredicted RBP15.81■□□□□ 0.12
CIITA-205ENST00000571186 XYLBO75191 536 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 KIF4AO95239 1232 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 PUM1Q14671 1186 aaKnown RBP eCLIP15.81■□□□□ 0.12
CIITA-205ENST00000571186 UBXN2BQ14CS0 331 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 SLC44A4Q53GD3 710 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 AXDND1Q5T1B0 1012 aaPredicted RBP15.81■□□□□ 0.12
CIITA-205ENST00000571186 PATJQ8NI35 1801 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 ITFG1Q8TB96 612 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 BCO2Q9BYV7 579 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 GPRC5CQ9NQ84 441 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 PRMT7Q9NVM4 692 aaPredicted RBP15.81■□□□□ 0.12
CIITA-205ENST00000571186 SNTG2Q9NY99 539 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 ZMYM2Q9UBW7 1377 aa15.81■□□□□ 0.12
CIITA-205ENST00000571186 TPRP12270 2363 aaKnown RBP15.8■□□□□ 0.12
CIITA-205ENST00000571186 COL4A3Q01955 1670 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 FAM170BA6NMN3 283 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 ADAM12O43184 909 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 LAMTOR5O43504 91 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 KINO60870 393 aaKnown RBP15.8■□□□□ 0.12
CIITA-205ENST00000571186 XRCC6P12956 609 aaKnown RBP eCLIP15.8■□□□□ 0.12
CIITA-205ENST00000571186 ATP2B1P20020 1258 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 ELAVL2Q12926 359 aaKnown RBP15.8■□□□□ 0.12
CIITA-205ENST00000571186 MLF2Q15773 248 aaPredicted RBP15.8■□□□□ 0.12
CIITA-205ENST00000571186 PDXDC1Q6P996 788 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 ZBTB8OSQ8IWT0 167 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 MAML2Q8IZL2 1156 aaPredicted RBP15.8■□□□□ 0.12
CIITA-205ENST00000571186 FBXO18Q8NFZ0 1043 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 SLC7A14Q8TBB6 771 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 PRIMPOLQ96LW4 560 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 MTF2Q9Y483 593 aaPredicted RBP15.8■□□□□ 0.12
CIITA-205ENST00000571186 NCOR2Q9Y618 2525 aa15.8■□□□□ 0.12
CIITA-205ENST00000571186 F5P12259 2224 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 TTLL13PA6NNM8 815 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 PTGESO14684 152 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 N4BP3O15049 544 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 RECQL4O94761 1208 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 LIG1P18858 919 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 CD72P21854 359 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 GJB2P29033 226 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 HOXA9P31269 272 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 OR1D2P34982 312 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 MCM2P49736 904 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 PRKCQQ04759 706 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 CSTF1Q05048 431 aaKnown RBP15.79■□□□□ 0.12
CIITA-205ENST00000571186 SAFBQ15424 915 aaKnown RBP eCLIP15.79■□□□□ 0.12
CIITA-205ENST00000571186 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 NOSTRINQ8IVI9 506 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 SUMF1Q8NBK3 374 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 KXD1Q9BQD3 176 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 CXCL16Q9H2A7 254 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 FZD8Q9H461 694 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 HCFC1R1Q9NWW0 138 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 USP20Q9Y2K6 914 aa15.79■□□□□ 0.12
CIITA-205ENST00000571186 CACNA1BQ00975 2339 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 NEMFO60524 1076 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 PFKPQ01813 784 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 PRPF4BQ13523 1007 aaKnown RBP15.78■□□□□ 0.12
CIITA-205ENST00000571186 RAB33AQ14088 237 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 FAM187BQ17R55 369 aa15.78■□□□□ 0.12
CIITA-205ENST00000571186 UVSSAQ2YD98 709 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms