RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 FUT10Q6P4F1 479 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 TMC5Q6UXY8 1006 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 TAS1R1Q7RTX1 841 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 RNF168Q8IYW5 571 aaPredicted RBP13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 MMTAG2Q9BU76 263 aaKnown RBP13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 TIPINQ9BVW5 301 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 DPP7Q9UHL4 492 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 ADAM28Q9UKQ2 775 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 GDAQ9Y2T3 454 aa13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 SF3B1O75533 1304 aaKnown RBP eCLIP13.6□□□□□ -0.23
CTDNEP1-205ENST00000570828 PTGESO14684 152 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 TEX28O15482 410 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 TADA2AO75478 443 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 EFEMP2O95967 443 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 GLUD1P00367 558 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 THP07101 528 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 PLA2G5P39877 138 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 ZXDAP98168 799 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 CREMQ03060 361 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 PTPN21Q16825 1174 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 USP41Q3LFD5 358 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 HYIQ5T013 277 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 NT5DC1Q5TFE4 455 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 RINT1Q6NUQ1 792 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 HFE2Q6ZVN8 426 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 KCNK18Q7Z418 384 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 BRAPQ7Z569 592 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 DAW1Q8N136 415 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 KCTD17Q8N5Z5 321 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 TDRD5Q8NAT2 981 aaKnown RBP13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 WNT2BQ93097 391 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 C17orf75Q9HAS0 396 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 KMT5AQ9NQR1 393 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 MAN1C1Q9NR34 630 aa13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
CTDNEP1-205ENST00000570828 VPS37CA5D8V6 355 aaPredicted RBP13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 TMEM221A6NGB7 291 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 C2CD4DB7Z1M9 353 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 M0R296 226 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 BMP15O95972 392 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 GUCY2CP25092 1073 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 ZNF568Q3ZCX4 644 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 KIAA0319Q5VV43 1072 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 KANK3Q6NY19 840 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 TRIM67Q6ZTA4 783 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 CCDC149Q6ZUS6 474 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 C1orf186Q6ZWK4 172 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 HASPINQ8TF76 798 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 RIN2Q8WYP3 895 aaPredicted RBP13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 B3GALT6Q96L58 329 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 AK8Q96MA6 479 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 MFSD14AQ96MC6 490 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 PLIN2Q99541 437 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 PAAF1Q9BRP4 392 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 MRPL4Q9BYD3 311 aaKnown RBP13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 GPR62Q9BZJ7 368 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 RXFP1Q9HBX9 757 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 CHST7Q9NS84 486 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 ARHGAP28Q9P2N2 729 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 CACNG4Q9UBN1 327 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 TNFSF13BQ9Y275 285 aa13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 RBM19Q9Y4C8 960 aaKnown RBP13.58□□□□□ -0.24
CTDNEP1-205ENST00000570828 KIF4AO95239 1232 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 PDCP20941 246 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 YARSP54577 528 aaKnown RBP13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 RAD51AP2Q09MP3 1159 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 ELAVL2Q12926 359 aaKnown RBP13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 STRN3Q13033 797 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 MAPK7Q13164 816 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 TMEM119Q4V9L6 283 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 GLRA4Q5JXX5 417 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 C15orf39Q6ZRI6 1047 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 GPR149Q86SP6 731 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 GPR65Q8IYL9 337 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 RASSF8Q8NHQ8 419 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 PNMA5Q96PV4 448 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 ACO2Q99798 780 aaKnown RBP13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 CCDC94Q9BW85 323 aaPredicted RBP13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 CDT1Q9H211 546 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 TMEM134Q9H6X4 195 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 TOPORSQ9NS56 1045 aaPredicted RBP13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 KCND2Q9NZV8 630 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 KCNG1Q9UIX4 513 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 USTQ9Y2C2 406 aa13.57□□□□□ -0.24
CTDNEP1-205ENST00000570828 SFI1A8K8P3 1242 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 SLC16A4O15374 487 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 SLC26A4O43511 780 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 PLA2G4BP0C869 781 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 PLS3P13797 630 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 UBA7P41226 1012 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 GRM5P41594 1212 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 SMTNP53814 917 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 SLC12A3P55017 1021 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 SIGLEC14Q08ET2 396 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 MTMR3Q13615 1198 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 CUL4AQ13619 759 aa13.56□□□□□ -0.24
CTDNEP1-205ENST00000570828 RTP2Q5QGT7 225 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms