RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 UHRF1Q96T88 793 aaPredicted RBP12.19□□□□□ -0.46
SMG6-206ENST00000570668 PAAF1Q9BRP4 392 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 HERC2P3Q9BVR0 1158 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 HAPLN2Q9GZV7 340 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 TNMDQ9H2S6 317 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 KBTBD4Q9NVX7 518 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 ANKFY1Q9P2R3 1169 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 FAM50BQ9Y247 325 aa12.19□□□□□ -0.46
SMG6-206ENST00000570668 CITO14578 2027 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 SMIM28A0A1B0GU29 152 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.18□□□□□ -0.46
SMG6-206ENST00000570668 CASTOR2A6NHX0 329 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 HNRNPDLO14979 420 aaKnown RBP12.18□□□□□ -0.46
SMG6-206ENST00000570668 CLASP2O75122 1294 aaKnown RBP12.18□□□□□ -0.46
SMG6-206ENST00000570668 PPP1R37O75864 691 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 HARSP12081 509 aaKnown RBP12.18□□□□□ -0.46
SMG6-206ENST00000570668 IL9P15248 144 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 KCNE1P15382 129 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 LIG4P49917 911 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 KRT85P78386 507 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 RBM10P98175 930 aaKnown RBP12.18□□□□□ -0.46
SMG6-206ENST00000570668 COASYQ13057 564 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 SMAD4Q13485 552 aaKnown RBP12.18□□□□□ -0.46
SMG6-206ENST00000570668 HSP90AA2PQ14568 343 aaPredicted RBP12.18□□□□□ -0.46
SMG6-206ENST00000570668 ZC2HC1CQ53FD0 456 aaPredicted RBP12.18□□□□□ -0.46
SMG6-206ENST00000570668 GLRA4Q5JXX5 417 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 RESP18Q5W5W9 173 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 FUT10Q6P4F1 479 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 GPR65Q8IYL9 337 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 SMRP1Q8NCR6 262 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 HVCN1Q96D96 273 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 BICD1Q96G01 975 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 SNX27Q96L92 541 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 STRA6Q9BX79 667 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 LRRC27Q9C0I9 530 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 OLFML3Q9NRN5 406 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 MRPL17Q9NRX2 175 aaKnown RBP12.18□□□□□ -0.46
SMG6-206ENST00000570668 CHST7Q9NS84 486 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 FAM13BQ9NYF5 915 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 CNTN3Q9P232 1028 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 CACNG4Q9UBN1 327 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 CD207Q9UJ71 328 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 ADAM28Q9UKQ2 775 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 BARX2Q9UMQ3 279 aaPredicted RBP12.18□□□□□ -0.46
SMG6-206ENST00000570668 SSX2IPQ9Y2D8 614 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 ATP6V1DQ9Y5K8 247 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 HCFC2Q9Y5Z7 792 aa12.18□□□□□ -0.46
SMG6-206ENST00000570668 POLR2DO15514 142 aaKnown RBP12.17□□□□□ -0.46
SMG6-206ENST00000570668 MEFVO15553 781 aaPredicted RBP12.17□□□□□ -0.46
SMG6-206ENST00000570668 MBTPS2O43462 519 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 TADA2AO75478 443 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 URODP06132 367 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 CLTAP09496 248 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 SRGAP2BP0DMP2 458 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 IDEP14735 1019 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 CA8P35219 290 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 AMPD3Q01432 767 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 DSG1Q02413 1049 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 SMAD2Q15796 467 aaKnown RBP12.17□□□□□ -0.46
SMG6-206ENST00000570668 CLUL1Q15846 466 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 KYAT1Q16773 422 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 SLC10A6Q3KNW5 377 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 HERC4Q5GLZ8 1057 aaPredicted RBP12.17□□□□□ -0.46
SMG6-206ENST00000570668 KIAA0319Q5VV43 1072 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 CNNM4Q6P4Q7 775 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 SLC39A4Q6P5W5 647 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 TAS1R1Q7RTX1 841 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 LEO1Q8WVC0 666 aaPredicted RBP12.17□□□□□ -0.46
SMG6-206ENST00000570668 RABGGTAQ92696 567 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 STAMQ92783 540 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 DHX58Q96C10 678 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 CHAMP1Q96JM3 812 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 UROC1Q96N76 676 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 ZMAT2Q96NC0 199 aaKnown RBP12.17□□□□□ -0.46
SMG6-206ENST00000570668 NECAB3Q96P71 396 aaPredicted RBP12.17□□□□□ -0.46
SMG6-206ENST00000570668 GPR62Q9BZJ7 368 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 TRIM9Q9C026 710 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 MRPL44Q9H9J2 332 aaKnown RBP12.17□□□□□ -0.46
SMG6-206ENST00000570668 PLEKHA5Q9HAU0 1116 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 MAGEF1Q9HAY2 307 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 SLC38A7Q9NVC3 462 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 PANK4Q9NVE7 773 aa12.17□□□□□ -0.46
SMG6-206ENST00000570668 SF3B1O75533 1304 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMG6-206ENST00000570668 TCHHQ07283 1943 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 A0A0B4J269 797 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 TMEM189-UBE2V1I3L0A0 370 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 OGTO15294 1046 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 FAM189A1O60320 539 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 KIF4AO95239 1232 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 CNPP09543 421 aaKnown RBP12.16□□□□□ -0.46
SMG6-206ENST00000570668 HOXB8P17481 243 aaPredicted RBP12.16□□□□□ -0.46
SMG6-206ENST00000570668 MATR3P43243 847 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMG6-206ENST00000570668 GLUD2P49448 558 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 SOX4Q06945 474 aaPredicted RBP12.16□□□□□ -0.46
SMG6-206ENST00000570668 USP41Q3LFD5 358 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 SEZ6Q53EL9 994 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 ADALQ6DHV7 355 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 KIAA1841Q6NSI8 718 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 ANKRD54Q6NXT1 300 aa12.16□□□□□ -0.46
SMG6-206ENST00000570668 DCLRE1AQ6PJP8 1040 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms