RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 LAD1O00515 517 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 ZNF862O60290 1169 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 LPXNO60711 386 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 EIF4BP23588 611 aaKnown RBP5.35□□□□□ -1.55
CNOT1-219ENST00000569882 WEE1P30291 646 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 NPEPPSP55786 919 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 ADAM17P78536 824 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 TAP1Q03518 808 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 RNASELQ05823 741 aaKnown RBP5.35□□□□□ -1.55
CNOT1-219ENST00000569882 MGAT3Q09327 533 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 MXD4Q14582 209 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-219ENST00000569882 BMS1Q14692 1282 aaKnown RBP5.35□□□□□ -1.55
CNOT1-219ENST00000569882 AAK1Q2M2I8 961 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 EARS2Q5JPH6 523 aaKnown RBP5.35□□□□□ -1.55
CNOT1-219ENST00000569882 FAM102BQ5T8I3 360 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 DTHD1Q6ZMT9 781 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 SLC24A5Q71RS6 500 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 ZNF410Q86VK4 478 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 ZBTB8OSQ8IWT0 167 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 C4orf19Q8IY42 314 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 THNSL1Q8IYQ7 743 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 RNF149Q8NC42 400 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 MICAL1Q8TDZ2 1067 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 SNX29Q8TEQ0 813 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 GDPD5Q8WTR4 605 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 TOP1MTQ969P6 601 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 TMEM143Q96AN5 459 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 IFT74Q96LB3 600 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 MBOAT7Q96N66 472 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 FAM193BQ96PV7 902 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-219ENST00000569882 NACC1Q96RE7 527 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 KIF2CQ99661 725 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 FDXACB1Q9BRP7 624 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-219ENST00000569882 C11orf84Q9BUA3 381 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-219ENST00000569882 BACH2Q9BYV9 841 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 TUFT1Q9NNX1 390 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 RGL1Q9NZL6 768 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 LRWD1Q9UFC0 647 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 VAV3Q9UKW4 847 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 NOC2LQ9Y3T9 749 aaKnown RBP5.35□□□□□ -1.55
CNOT1-219ENST00000569882 PCDHB12Q9Y5F1 795 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 COL4A3BPQ9Y5P4 624 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-219ENST00000569882 TTC3P53804 2025 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 MYH11P35749 1972 aa5.35□□□□□ -1.55
CNOT1-219ENST00000569882 RALGAPA2Q2PPJ7 1873 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 LCHNA4D1U4 455 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 LINC01553A4QN01 128 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 VWA3AA6NCI4 1184 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 RFXAPO00287 272 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 ENPP3O14638 875 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 ASAP2O43150 1006 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 MAFO75444 373 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 CLSTN1O94985 981 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 BMP15O95972 392 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 KRT18P05783 430 aaKnown RBP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 DARSP14868 501 aaKnown RBP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 FGFR4P22455 802 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 MATR3P43243 847 aaKnown RBP eCLIP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 SARSP49591 514 aaKnown RBP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 RAB27AP51159 221 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 GPC3P51654 580 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 ST3GAL1Q11201 340 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 GPM6BQ13491 265 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 PPP2R5AQ15172 486 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 SF3A1Q15459 793 aaKnown RBP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 TIGD5Q53EQ6 642 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 GLB1LQ6UWU2 654 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 C20orf204Q6ZNR8 217 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 FAM43BQ6ZT52 329 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 ANO5Q75V66 913 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 BRAPQ7Z569 592 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 APBB1IPQ7Z5R6 666 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 FERMT3Q86UX7 667 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 FAM228AQ86W67 206 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 TMEM192Q8IY95 271 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 LRRC43Q8N309 656 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 MCPH1Q8NEM0 835 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 DEPTORQ8TB45 409 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 URGCPQ8TCY9 931 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 PIGOQ8TEQ8 1089 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 HAS1Q92839 578 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 PGBD4Q96DM1 585 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 CALML4Q96GE6 196 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 ADPGKQ9BRR6 497 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 C17orf80Q9BSJ5 609 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 ANP32EQ9BTT0 268 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 GSX2Q9BZM3 304 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 GBP3Q9H0R5 595 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 POLR3FQ9H1D9 316 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 AGO3Q9H9G7 860 aaKnown RBP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 ERVK-5Q9HDB9 667 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 ANKEF1Q9NU02 776 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 THEGQ9P2T0 379 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 PUF60Q9UHX1 559 aaKnown RBP5.34□□□□□ -1.55
CNOT1-219ENST00000569882 DNM3Q9UQ16 869 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 INPP5FQ9Y2H2 1132 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 PCDHB6Q9Y5E3 794 aa5.34□□□□□ -1.55
CNOT1-219ENST00000569882 COL4A4P53420 1690 aaPredicted RBP5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms