RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 CACNG4Q9UBN1 327 aa14.45□□□□□ -0.1
SPG7-221ENST00000569720 KIAA1024Q9UPX6 916 aa14.45□□□□□ -0.1
SPG7-221ENST00000569720 K7ERI5 159 aa14.44□□□□□ -0.1
SPG7-221ENST00000569720 STK25O00506 426 aa14.44□□□□□ -0.1
SPG7-221ENST00000569720 HNRNPA1P09651 372 aaKnown RBP eCLIP14.44□□□□□ -0.1
SPG7-221ENST00000569720 LAMP2P13473 410 aa14.44□□□□□ -0.1
SPG7-221ENST00000569720 ATF7IP2Q5U623 682 aa14.44□□□□□ -0.1
SPG7-221ENST00000569720 EEF1DP3Q658K8 133 aa14.44□□□□□ -0.1
SPG7-221ENST00000569720 CWF19L1Q69YN2 538 aaKnown RBP14.44□□□□□ -0.1
SPG7-221ENST00000569720 GET4Q7L5D6 327 aaPredicted RBP14.44□□□□□ -0.1
SPG7-221ENST00000569720 LNX1Q8TBB1 728 aaPredicted RBP14.44□□□□□ -0.1
SPG7-221ENST00000569720 SNX29Q8TEQ0 813 aa14.44□□□□□ -0.1
SPG7-221ENST00000569720 DDX19AQ9NUU7 478 aaKnown RBP14.44□□□□□ -0.1
SPG7-221ENST00000569720 WNT16Q9UBV4 365 aa14.44□□□□□ -0.1
SPG7-221ENST00000569720 FBXW11Q9UKB1 542 aa14.44□□□□□ -0.1
SPG7-221ENST00000569720 USP20Q9Y2K6 914 aa14.44□□□□□ -0.1
SPG7-221ENST00000569720 ZFP37Q9Y6Q3 630 aaPredicted RBP14.44□□□□□ -0.1
SPG7-221ENST00000569720 VWA8A3KMH1 1905 aa14.44□□□□□ -0.1
SPG7-221ENST00000569720 MYH11P35749 1972 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 PHLPP2Q6ZVD8 1323 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 PROB1E7EW31 1015 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 LAD1O00515 517 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 NARSO43776 548 aaKnown RBP14.43□□□□□ -0.1
SPG7-221ENST00000569720 XYLBO75191 536 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 CFHP08603 1231 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 SRFP11831 508 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 FSHRP23945 695 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 YARSP54577 528 aaKnown RBP14.43□□□□□ -0.1
SPG7-221ENST00000569720 PTGDRQ13258 359 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 NAB2Q15742 525 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 ECM1Q16610 540 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 PPM1LQ5SGD2 360 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 KRT79Q5XKE5 535 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.43□□□□□ -0.1
SPG7-221ENST00000569720 SLC44A3Q8N4M1 653 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 C4orf32Q8N8J7 132 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 IGSF22Q8N9C0 903 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 RSAD2Q8WXG1 361 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 UROC1Q96N76 676 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 KIF2CQ99661 725 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 CLSTN3Q9BQT9 956 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 KIFC3Q9BVG8 833 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 POLD4Q9HCU8 107 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 TOPORSQ9NS56 1045 aaPredicted RBP14.43□□□□□ -0.1
SPG7-221ENST00000569720 DNM3Q9UQ16 869 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 TNFSF13BQ9Y275 285 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 KIF3AQ9Y496 699 aa14.43□□□□□ -0.1
SPG7-221ENST00000569720 CITO14578 2027 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 DOCK6Q96HP0 2047 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 MYO15AQ9UKN7 3530 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 CCDC169A6NNP5 214 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 TMEM189-UBE2V1I3L0A0 370 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 TRAPPC3O43617 180 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 EDN1P05305 212 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 NPR3P17342 541 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 U2AF2P26368 475 aaKnown RBP eCLIP14.42□□□□□ -0.1
SPG7-221ENST00000569720 HOXA9P31269 272 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 NBL1P41271 181 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 DMP1Q13316 513 aaPredicted RBP14.42□□□□□ -0.1
SPG7-221ENST00000569720 NBR1Q14596 966 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 NT5DC1Q5TFE4 455 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 DCLRE1AQ6PJP8 1040 aa14.42□□□□□ -0.1
SPG7-221ENST00000569720 CCDC94Q9BW85 323 aaPredicted RBP14.42□□□□□ -0.1
SPG7-221ENST00000569720 PI15O43692 258 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 B3GAT3O94766 335 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 C8AP07357 584 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 OR1D2P34982 312 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 PEX3P56589 373 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 UVSSAQ2YD98 709 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 ZNF568Q3ZCX4 644 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 GLRA4Q5JXX5 417 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 DTHD1Q6ZMT9 781 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 GRASPQ7Z6J2 395 aaPredicted RBP14.41□□□□□ -0.1
SPG7-221ENST00000569720 CCDC105Q8IYK2 499 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 DTWD2Q8NBA8 298 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 SNX21Q969T3 373 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 DRC1Q96MC2 740 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 PPP1R10Q96QC0 940 aaKnown RBP14.41□□□□□ -0.1
SPG7-221ENST00000569720 MRPL4Q9BYD3 311 aaKnown RBP14.41□□□□□ -0.1
SPG7-221ENST00000569720 CXCL16Q9H2A7 254 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 TMEM134Q9H6X4 195 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 CA14Q9ULX7 337 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 POLIQ9UNA4 740 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 RBM19Q9Y4C8 960 aaKnown RBP14.41□□□□□ -0.1
SPG7-221ENST00000569720 PCDHB6Q9Y5E3 794 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 DMDP11532 3685 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 MYH15Q9Y2K3 1946 aa14.41□□□□□ -0.1
SPG7-221ENST00000569720 ANHXE9PGG2 379 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 E9PMD0 336 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 HIP1RO75146 1068 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 FGFR3P22607 806 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 PRPHP41219 470 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 GRM5P41594 1212 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 NPTX2P47972 431 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 CLCNKBP51801 687 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 HTR4Q13639 388 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 RAB33AQ14088 237 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 AXDND1Q5T1B0 1012 aaPredicted RBP14.4□□□□□ -0.1
SPG7-221ENST00000569720 RTL10Q7L3V2 364 aa14.4□□□□□ -0.1
SPG7-221ENST00000569720 DDX27Q96GQ7 796 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms