RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 AFF1P51825 1210 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 KPNA1P52294 538 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 MTMR1Q13613 665 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 PON2Q15165 354 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 TAF1BQ53T94 588 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 PRSS36Q5K4E3 855 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 TWF2Q6IBS0 349 aaKnown RBP7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 FUT10Q6P4F1 479 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 LRRC69Q6ZNQ3 347 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 GLRX5Q86SX6 157 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 METTL13Q8N6R0 699 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 LINC01465Q8N7H1 131 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 SLC7A14Q8TBB6 771 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 SPIRE2Q8WWL2 714 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 SMARCD2Q92925 531 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 B3GALT6Q96L58 329 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 MAP7D2Q96T17 732 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 PI4K2AQ9BTU6 479 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 GPR62Q9BZJ7 368 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 SEMA4CQ9C0C4 833 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 TRPV4Q9HBA0 871 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 MBD1Q9UIS9 605 aaPredicted RBP7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 PCDHB9Q9Y5E1 797 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 UBIAD1Q9Y5Z9 338 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 LRBAP50851 2863 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 NFASCO94856 1347 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 F8P00451 2351 aa7.51□□□□□ -1.21
HERPUD1-217ENST00000569429 WDR27A2RRH5 827 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 RAB11FIP3O75154 756 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 POMCP01189 267 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 PCP11498 1178 aaKnown RBP7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 TMOD1P28289 359 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 DPP6P42658 865 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 IL12RB1P42701 662 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 OR1G1P47890 313 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 CLCN3P51790 818 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 ATXN3P54252 364 aaPredicted RBP7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 DSC1Q08554 894 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 SLC14A1Q13336 389 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 ALX1Q15699 326 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 AXDND1Q5T1B0 1012 aaPredicted RBP7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 ZNF746Q6NUN9 644 aaPredicted RBP7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 MRPL10Q7Z7H8 261 aaKnown RBP7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 SLCO6A1Q86UG4 719 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 SYT12Q8IV01 421 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 PDCD7Q8N8D1 485 aaKnown RBP7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 FAM200AQ8TCP9 573 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 E2F7Q96AV8 911 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 HHIPQ96QV1 700 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 KIF2CQ99661 725 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 CLSTN3Q9BQT9 956 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 COLEC11Q9BWP8 271 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 LRRCC1Q9C099 1032 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 RSAD1Q9HA92 442 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 PKD2L1Q9P0L9 805 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 AKT3Q9Y243 479 aa7.5□□□□□ -1.21
HERPUD1-217ENST00000569429 PIK3CDO00329 1044 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 ZNF197O14709 1029 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 TNFRSF10BO14763 440 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 SH3BP5O60239 455 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 APBB3O95704 486 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 PTPN2P17706 415 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 ATP4AP20648 1035 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 DHPSP49366 369 aaPredicted RBP7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 RHDQ02161 417 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 FCHO2Q0JRZ9 810 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 C4orf17Q53FE4 359 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 USP39Q53GS9 565 aaKnown RBP7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 CCDC178Q5BJE1 867 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 PEAR1Q5VY43 1037 aaPredicted RBP7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 FAM160B1Q5W0V3 765 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 EFCAB12Q6NXP0 572 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 IFNLR1Q8IU57 520 aaPredicted RBP7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 FMNL3Q8IVF7 1028 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 GALNT15Q8N3T1 639 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 STAG2Q8N3U4 1231 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 CAMK1GQ96NX5 476 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 KAT14Q9H8E8 782 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 DNAAF2Q9NVR5 837 aaKnown RBP7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 CEP131Q9UPN4 1083 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 STK24Q9Y6E0 443 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 NCANO14594 1321 aa7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 RP1L1Q8IWN7 2480 aaPredicted RBP7.49□□□□□ -1.21
HERPUD1-217ENST00000569429 TRIP11Q15643 1979 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 HEPACAM2A8MVW5 462 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 KLRF2D3W0D1 207 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 F8W810 466 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 MEIS2O14770 477 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 RRP8O43159 456 aaKnown RBP7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 NR1I2O75469 434 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 DKK1O94907 266 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 HOXD12P35452 270 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 VIPR2P41587 438 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 NT5C2P49902 561 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 CACNB1Q02641 598 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 RAB33AQ14088 237 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 RTP2Q5QGT7 225 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 ZMYM1Q5SVZ6 1142 aa7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 PRSS55Q6UWB4 352 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-217ENST00000569429 ABHD15Q6UXT9 468 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms