RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 JRKLQ9Y4A0 524 aa7.13□□□□□ -1.27
HERC2-211ENST00000569335 SMCHD1A6NHR9 2005 aa7.13□□□□□ -1.27
HERC2-211ENST00000569335 DICER1Q9UPY3 1922 aaKnown RBP7.13□□□□□ -1.27
HERC2-211ENST00000569335 PHIPQ8WWQ0 1821 aa7.13□□□□□ -1.27
HERC2-211ENST00000569335 PAPPA2Q9BXP8 1791 aa7.13□□□□□ -1.27
HERC2-211ENST00000569335 ZMYM2Q9UBW7 1377 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 NPHP3-ACAD11A0A0J9YXS1 232 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 TARSL2A2RTX5 802 aaKnown RBP7.12□□□□□ -1.27
HERC2-211ENST00000569335 LRRC53A6NM62 1247 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 VWA5AO00534 786 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 CES2O00748 559 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 TLR2O60603 784 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 AKAP3O75969 853 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 CLSTN1O94985 981 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 NR3C1P04150 777 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 EPB41P11171 864 aaKnown RBP7.12□□□□□ -1.27
HERC2-211ENST00000569335 PTPRAP18433 802 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 GATA4P43694 442 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 GMPSP49915 693 aaPredicted RBP7.12□□□□□ -1.27
HERC2-211ENST00000569335 KIF11P52732 1056 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 JAM2P57087 298 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 MRPS9P82933 396 aaKnown RBP7.12□□□□□ -1.27
HERC2-211ENST00000569335 CKAP4Q07065 602 aaKnown RBP7.12□□□□□ -1.27
HERC2-211ENST00000569335 SLC18A3Q16572 532 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 CCDC122Q5T0U0 273 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 KLHDC7AQ5VTJ3 777 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 SFMBT2Q5VUG0 894 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 ZNF746Q6NUN9 644 aaPredicted RBP7.12□□□□□ -1.27
HERC2-211ENST00000569335 WDR93Q6P2C0 686 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 CCDC174Q6PII3 467 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 VSIG10LQ86VR7 867 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 LRRN4CLQ8ND94 238 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 SLC35C1Q96A29 364 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 LENG1Q96BZ8 264 aaPredicted RBP7.12□□□□□ -1.27
HERC2-211ENST00000569335 CDHR1Q96JP9 859 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 INPP4AQ96PE3 977 aaPredicted RBP7.12□□□□□ -1.27
HERC2-211ENST00000569335 HHIPQ96QV1 700 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 IWS1Q96ST2 819 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 PDCD2LQ9BRP1 358 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 LXNQ9BS40 222 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 TMEM206Q9H813 350 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 ZFYVE28Q9HCC9 887 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 FBXO28Q9NVF7 368 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 RGL1Q9NZL6 768 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 COL20A1Q9P218 1284 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 CNOT7Q9UIV1 285 aaKnown RBP7.12□□□□□ -1.27
HERC2-211ENST00000569335 KCNG1Q9UIX4 513 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 HACL1Q9UJ83 578 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 PPME1Q9Y570 386 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 PCDHA13Q9Y5I0 950 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 SAR1BQ9Y6B6 198 aa7.12□□□□□ -1.27
HERC2-211ENST00000569335 A0A0A6YYK5 440 aaPredicted RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 A0A0U1RQJ8 604 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 CTAGE15A4D2H0 777 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 C9orf172C9J069 976 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 PES1O00541 588 aaKnown RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 NFIBO00712 420 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 MAP2K7O14733 419 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 DKC1O60832 514 aaKnown RBP eCLIP7.11□□□□□ -1.27
HERC2-211ENST00000569335 TACC1O75410 805 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 SSBP05455 408 aaKnown RBP eCLIP7.11□□□□□ -1.27
HERC2-211ENST00000569335 CTAGE8P0CG41 777 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 MYBP10242 640 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 XRCC5P13010 732 aaKnown RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 UCHL3P15374 230 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 TCP1P17987 556 aaKnown RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 MCM3P25205 808 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 PON1P27169 355 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 PSMC2P35998 433 aaKnown RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 EIF4A3P38919 411 aaKnown RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 QARSP47897 775 aaKnown RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 RARRES1P49788 294 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 NPEPPSP55786 919 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 PSMC5P62195 406 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 GTF2BQ00403 316 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 ITGB3BPQ13352 177 aaPredicted RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 CTTNQ14247 550 aaKnown RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 SETDB1Q15047 1291 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 PGM5Q15124 567 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 TCEAL1Q15170 157 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 EXOC3L4Q17RC7 722 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 TXNDC11Q6PKC3 985 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 LBX2Q6XYB7 198 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 CATSPERGQ6ZRH7 1159 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 RRAGAQ7L523 313 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 CACNA2D4Q7Z3S7 1137 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 IRF2BP2Q7Z5L9 587 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 KIAA1328Q86T90 577 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 CTAGE6Q86UF2 777 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 TPH2Q8IWU9 490 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 CTAGE4Q8IX94 777 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 NELFCDQ8IXH7 590 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 FAM178BQ8IXR5 827 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 SMAP1Q8IYB5 467 aaPredicted RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 DAW1Q8N136 415 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 KRT222Q8N1A0 295 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 CACTIN-AS1Q8N1I8 211 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 ATRIPQ8WXE1 791 aa7.11□□□□□ -1.27
HERC2-211ENST00000569335 SECISBP2LQ93073 1101 aaKnown RBP7.11□□□□□ -1.27
HERC2-211ENST00000569335 NTPCRQ9BSD7 190 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms