RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 A0A1B0GUA9 196 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 DKC1O60832 514 aaKnown RBP eCLIP16.46■□□□□ 0.231e-5■■■■□ 25.7
USB1-214ENST00000568848 AXLP30530 894 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 HOXC13P31276 330 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 OR1D2P34982 312 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 TFDP1Q14186 410 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 GRM2Q14416 872 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 MXD4Q14582 209 aaPredicted RBP16.46■□□□□ 0.23
USB1-214ENST00000568848 PUM1Q14671 1186 aaKnown RBP eCLIP16.46■□□□□ 0.23
USB1-214ENST00000568848 LIN9Q5TKA1 542 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 ELMSAN1Q6PJG2 1045 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 TPRG1Q6ZUI0 275 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 HDAC7Q8WUI4 952 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 NXPE3Q969Y0 559 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 ZNF274Q96GC6 653 aaPredicted RBP16.46■□□□□ 0.23
USB1-214ENST00000568848 HSD17B14Q9BPX1 270 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 TTPALQ9BTX7 342 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 LTB4R2Q9NPC1 389 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 HEBP1Q9NRV9 189 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.46■□□□□ 0.23
USB1-214ENST00000568848 NCDNQ9UBB6 729 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 DPP7Q9UHL4 492 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 TPCN1Q9ULQ1 816 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 GDAQ9Y2T3 454 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.23
USB1-214ENST00000568848 SF3B1O75533 1304 aaKnown RBP eCLIP16.45■□□□□ 0.22
USB1-214ENST00000568848 TBX3O15119 743 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 LAMTOR5O43504 91 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 KINO60870 393 aaKnown RBP16.45■□□□□ 0.22
USB1-214ENST00000568848 LARGE1O95461 756 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 CEBPBP17676 345 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 TXKP42681 527 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 TUSC3Q13454 348 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 AXDND1Q5T1B0 1012 aaPredicted RBP16.45■□□□□ 0.22
USB1-214ENST00000568848 ZC3H14Q6PJT7 736 aaKnown RBP16.45■□□□□ 0.22
USB1-214ENST00000568848 CD300LGQ6UXG3 332 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 NECAB1Q8N987 351 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 C3orf58Q8NDZ4 430 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 PIK3R5Q8WYR1 880 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 TNFRSF25Q93038 417 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 DDX23Q9BUQ8 820 aaKnown RBP16.45■□□□□ 0.22
USB1-214ENST00000568848 TMEM60Q9H2L4 133 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 SEMA4AQ9H3S1 761 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 PARD6AQ9NPB6 346 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 F5P12259 2224 aa16.45■□□□□ 0.22
USB1-214ENST00000568848 DCDC2BA2VCK2 349 aa16.44■□□□□ 0.22
USB1-214ENST00000568848 FDPSP14324 419 aaKnown RBP16.44■□□□□ 0.22
USB1-214ENST00000568848 GCFC2P16383 781 aaKnown RBP16.44■□□□□ 0.22
USB1-214ENST00000568848 TKTP29401 623 aaKnown RBP16.44■□□□□ 0.22
USB1-214ENST00000568848 BRCC3P46736 316 aa16.44■□□□□ 0.22
USB1-214ENST00000568848 TMEM132AQ24JP5 1023 aa16.44■□□□□ 0.22
USB1-214ENST00000568848 VARS2Q5ST30 1063 aaKnown RBP16.44■□□□□ 0.22
USB1-214ENST00000568848 GALNT17Q6IS24 598 aa16.44■□□□□ 0.22
USB1-214ENST00000568848 TCEAL4Q96EI5 215 aa16.44■□□□□ 0.22
USB1-214ENST00000568848 CCDC43Q96MW1 224 aaKnown RBP16.44■□□□□ 0.22
USB1-214ENST00000568848 BCO2Q9BYV7 579 aa16.44■□□□□ 0.22
USB1-214ENST00000568848 PPME1Q9Y570 386 aa16.44■□□□□ 0.22
USB1-214ENST00000568848 CDY1Q9Y6F8 540 aa16.44■□□□□ 0.22
USB1-214ENST00000568848 MED24O75448 989 aa16.43■□□□□ 0.22
USB1-214ENST00000568848 DGAT1O75907 488 aa16.43■□□□□ 0.22
USB1-214ENST00000568848 ATP2B1P20020 1258 aa16.43■□□□□ 0.22
USB1-214ENST00000568848 ATXN1P54253 815 aaKnown RBP16.43■□□□□ 0.22
USB1-214ENST00000568848 NCBP1Q09161 790 aaKnown RBP16.43■□□□□ 0.22
USB1-214ENST00000568848 CALCRLQ16602 461 aa16.43■□□□□ 0.22
USB1-214ENST00000568848 PABPC1LQ4VXU2 614 aaKnown RBP16.43■□□□□ 0.22
USB1-214ENST00000568848 TANGO2Q6ICL3 276 aa16.43■□□□□ 0.22
USB1-214ENST00000568848 EXOC8Q8IYI6 725 aa16.43■□□□□ 0.22
USB1-214ENST00000568848 HACE1Q8IYU2 909 aa16.43■□□□□ 0.22
USB1-214ENST00000568848 TTC12Q9H892 705 aaPredicted RBP16.43■□□□□ 0.22
USB1-214ENST00000568848 NDRG2Q9UN36 371 aaKnown RBP16.43■□□□□ 0.22
USB1-214ENST00000568848 SMG5Q9UPR3 1016 aaKnown RBP16.43■□□□□ 0.22
USB1-214ENST00000568848 NCANO14594 1321 aa16.43■□□□□ 0.22
USB1-214ENST00000568848 SPATA31C1P0DKV0 1188 aa16.42■□□□□ 0.22
USB1-214ENST00000568848 CLCNKBP51801 687 aa16.42■□□□□ 0.22
USB1-214ENST00000568848 ARPP19P56211 112 aa16.42■□□□□ 0.22
USB1-214ENST00000568848 MTAPQ13126 283 aa16.42■□□□□ 0.22
USB1-214ENST00000568848 FZD5Q13467 585 aa16.42■□□□□ 0.22
USB1-214ENST00000568848 CEP120Q8N960 986 aa16.42■□□□□ 0.22
USB1-214ENST00000568848 ANKEF1Q9NU02 776 aa16.42■□□□□ 0.22
USB1-214ENST00000568848 ORC3Q9UBD5 711 aaPredicted RBP16.42■□□□□ 0.22
USB1-214ENST00000568848 PCDHA12Q9UN75 941 aa16.42■□□□□ 0.22
USB1-214ENST00000568848 MRPS23Q9Y3D9 190 aaKnown RBP16.42■□□□□ 0.22
USB1-214ENST00000568848 TICRRQ7Z2Z1 1910 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 BTBD18B2RXH4 712 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 JAK2O60674 1132 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 PRKCBP05771 671 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 THP07101 528 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 RHOP08100 348 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 HNRNPA1P09651 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
USB1-214ENST00000568848 GJA1P17302 382 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 FCARP24071 287 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 KRT2P35908 639 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 CCR2P41597 374 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 SOX4Q06945 474 aaPredicted RBP16.41■□□□□ 0.22
USB1-214ENST00000568848 CPLX2Q6PUV4 134 aaKnown RBP16.41■□□□□ 0.22
USB1-214ENST00000568848 GPIHBP1Q8IV16 184 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 DDX27Q96GQ7 796 aaKnown RBP16.41■□□□□ 0.22
USB1-214ENST00000568848 SHDQ96IW2 340 aa16.41■□□□□ 0.22
USB1-214ENST00000568848 FZD8Q9H461 694 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms