RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	TMEM31	Q5JXX7	168 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	SPECC1	Q5M775	1068 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	RARS2	Q5T160	578 aa	Known RBP	11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	FAM171A1	Q5VUB5	890 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	FAM173B	Q6P4H8	233 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	DCLRE1A	Q6PJP8	1040 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	GSTCD	Q8NEC7	633 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	RIN2	Q8WYP3	895 aa	Predicted RBP	11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	FBXL18	Q96ME1	805 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	USP28	Q96RU2	1077 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	TTPAL	Q9BTX7	342 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	CDT1	Q9H211	546 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	TSHZ2	Q9NRE2	1034 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	MARCH5	Q9NX47	278 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	FBXO2	Q9UK22	296 aa	Predicted RBP	11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	CFAP45	Q9UL16	551 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	NUB1	Q9Y5A7	615 aa		11.34	□□□□□ -0.59
UBR1-207	ENST00000568782	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	C19orf67	A6NJJ6	358 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	SPTLC2	O15270	562 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	B4GALT3	O60512	393 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	C1R	P00736	705 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	EPCAM	P16422	314 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	GAP43	P17677	238 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	CLCN4	P51793	760 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	ARSH	Q5FYA8	562 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	GLRA4	Q5JXX5	417 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	ATL3	Q6DD88	541 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	SLFN12L	Q6IEE8	588 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	SYCE2	Q6PIF2	218 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	STXBP4	Q6ZWJ1	553 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	DYM	Q7RTS9	669 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	PLCD3	Q8N3E9	789 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	SPRYD3	Q8NCJ5	442 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	VN1R2	Q8NFZ6	395 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	HASPIN	Q8TF76	798 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	RABGGTA	Q92696	567 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	ACSF2	Q96CM8	615 aa	Predicted RBP	11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	CLIC6	Q96NY7	704 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	S1PR5	Q9H228	398 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	PLEKHA4	Q9H4M7	779 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	EPHX3	Q9H6B9	360 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	PIDD1	Q9HB75	910 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	BLOC1S4	Q9NUP1	217 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	FNIP2	Q9P278	1114 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	SEL1L	Q9UBV2	794 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	TBX20	Q9UMR3	447 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	EXOC7	Q9UPT5	735 aa		11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.33	□□□□□ -0.6
UBR1-207	ENST00000568782	SMIM28	A0A1B0GU29	152 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PTGES	O14684	152 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	TEX28	O15482	410 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PPP6R2	O75170	966 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	YEATS4	O95619	227 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	BRD1	O95696	1058 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	CLTA	P09496	248 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	ZSCAN22	P10073	491 aa	Predicted RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	IDE	P14735	1019 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	RPL9	P32969	192 aa	Known RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	NASP	P49321	788 aa	Predicted RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	GRIN1	Q05586	938 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PPP2R3A	Q06190	1150 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PSMD5	Q16401	504 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	KIAA0319	Q5VV43	1072 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	TMC5	Q6UXY8	1006 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	CYP26C1	Q6V0L0	522 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	TAS1R1	Q7RTX1	841 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PALB2	Q86YC2	1186 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	RNF135	Q8IUD6	432 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	KCNG4	Q8TDN1	519 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	SLC22A17	Q8WUG5	538 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	HDAC7	Q8WUI4	952 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	SUSD6	Q92537	303 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	STAM	Q92783	540 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PPP1R10	Q96QC0	940 aa	Known RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	TSPAN18	Q96SJ8	248 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	MSTO1	Q9BUK6	570 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	VN1R3	Q9BXE9	311 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PANK2	Q9BZ23	570 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	GPR62	Q9BZJ7	368 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	MRPL44	Q9H9J2	332 aa	Known RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	RPF1	Q9H9Y2	349 aa	Known RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PLEKHA5	Q9HAU0	1116 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	RXFP1	Q9HBX9	757 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PTPRH	Q9HD43	1115 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	CD320	Q9NPF0	282 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	MAN1C1	Q9NR34	630 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	CHST7	Q9NS84	486 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	TFIP11	Q9UBB9	837 aa	Known RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PCDHB13	Q9Y5F0	798 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	MYO10	Q9HD67	2058 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	TTC28	Q96AY4	2481 aa		11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	PDCD11	Q14690	1871 aa	Known RBP	11.32	□□□□□ -0.6
UBR1-207	ENST00000568782	LOC730098	B7Z3J9	87 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	TMEM189-UBE2V1	I3L0A0	370 aa		11.31	□□□□□ -0.6
UBR1-207	ENST00000568782	TULP1	O00294	542 aa	Predicted RBP	11.31	□□□□□ -0.6

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